Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_029057.1
Length=134742
Score E
Sequences producing significant alignments: (Bits) Value
seq2789 161 9e-35
>seq2789
Length=15484
Score = 161 bits (178), Expect = 9e-35
Identities = 210/286 (73%), Gaps = 6/286 (2%)
Strand=Plus/Plus
Query 75417 GTTTACCTTTATTAAATGGACGTTTATTAGGGTTCCCAAGGTATCCCGAAACACGTCTGA 75476
|||| ||||||||||| || | | || |||| | || | ||||| | || | ||| |
Sbjct 2131 GTTTTCCTTTATTAAACGGCCTTGAATCAGGGCTACCTAAATATCCACATACTCTTCTTA 2190
Query 75477 TAACATACATTTTATCTTG-ATCAGAATTATCACAACTAGGGCAAACAAAACCTTTACTT 75535
| ||| | | ||| ||||| |||| |||| |||||||||| ||| |||||| ||||||
Sbjct 2191 TCACAGATACTTT-TCTTGCATCATGATTACCACAACTAGGACAAGAAAAACCCTTACTT 2249
Query 75536 GTTGAATTCA--TCGTTCCTTCAAAACCACATTCGAAACACTGGTCTGCTGGAGTATTAA 75593
|| ||| | ||| |||| | | |||||||| |||||| ||| |||||||||
Sbjct 2250 GTGCAATCAAATTCG--CCTTTATATCCACATTCATAACACTCGTCAATTGGAGTATTTG 2307
Query 75594 TTGCATAGTAAGGTGTAACGTTATAACTAAAATCCCACAGATCCTCTAACGCTTCTAAAT 75653
|| |||| ||||| || ||||||||||||||||| | ||| ||||| |||| | ||
Sbjct 2308 TTCCATAATAAGGCACAAATTTATAACTAAAATCCCAAACATCTTCTAATGCTTTAATAT 2367
Query 75654 TACGTCTCATATCAGGAAGTTCACTGTATGAGATAAATCCTCCATT 75699
| |||||||| |||| ||||| ||| | ||||| || |||||
Sbjct 2368 TTTTTCTCATATTAGGATATTCACCGTAACAAATAAAGCCACCATT 2413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430886486655567
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |