Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_029057.1 Length=134742 Score E Sequences producing significant alignments: (Bits) Value seq2789 161 9e-35 >seq2789 Length=15484 Score = 161 bits (178), Expect = 9e-35 Identities = 210/286 (73%), Gaps = 6/286 (2%) Strand=Plus/Plus Query 75417 GTTTACCTTTATTAAATGGACGTTTATTAGGGTTCCCAAGGTATCCCGAAACACGTCTGA 75476 |||| ||||||||||| || | | || |||| | || | ||||| | || | ||| | Sbjct 2131 GTTTTCCTTTATTAAACGGCCTTGAATCAGGGCTACCTAAATATCCACATACTCTTCTTA 2190 Query 75477 TAACATACATTTTATCTTG-ATCAGAATTATCACAACTAGGGCAAACAAAACCTTTACTT 75535 | ||| | | ||| ||||| |||| |||| |||||||||| ||| |||||| |||||| Sbjct 2191 TCACAGATACTTT-TCTTGCATCATGATTACCACAACTAGGACAAGAAAAACCCTTACTT 2249 Query 75536 GTTGAATTCA--TCGTTCCTTCAAAACCACATTCGAAACACTGGTCTGCTGGAGTATTAA 75593 || ||| | ||| |||| | | |||||||| |||||| ||| ||||||||| Sbjct 2250 GTGCAATCAAATTCG--CCTTTATATCCACATTCATAACACTCGTCAATTGGAGTATTTG 2307 Query 75594 TTGCATAGTAAGGTGTAACGTTATAACTAAAATCCCACAGATCCTCTAACGCTTCTAAAT 75653 || |||| ||||| || ||||||||||||||||| | ||| ||||| |||| | || Sbjct 2308 TTCCATAATAAGGCACAAATTTATAACTAAAATCCCAAACATCTTCTAATGCTTTAATAT 2367 Query 75654 TACGTCTCATATCAGGAAGTTCACTGTATGAGATAAATCCTCCATT 75699 | |||||||| |||| ||||| ||| | ||||| || ||||| Sbjct 2368 TTTTTCTCATATTAGGATATTCACCGTAACAAATAAAGCCACCATT 2413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430886486655567