Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq25290 96.9 8e-15
seq10106 91.5 4e-13
>seq25290
Length=1416
Score = 96.9 bits (106), Expect = 8e-15
Identities = 83/103 (81%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727
||| ||| || || ||||||||||| |||||||||||||| | | || || ||||| |
Sbjct 697 ATACTTCTGGGTGTCCAAAAAATCAAAATAAATGTTGATATAAAACTGGGTCTCCTCCTC 638
Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770
|| |||||||||||| |||||| ||||||| |||||||||
Sbjct 637 CTATTGGATCAAAAAATGAAGTATTTAAATTTCGATCAGTTAA 595
>seq10106
Length=1307
Score = 91.5 bits (100), Expect = 4e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||| || ||||| || || || ||||| ||||| || ||||| || ||||||||
Sbjct 351 GAAGATTTGTCCGTCAGTGATGGAAATCACATTGGTAGGAATGTAAGCGGACACATCACC 292
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574
||||||||||| | || || ||||| || | ||| ||||||||
Sbjct 291 AGCTTGTGTTTCAATCACGGGCAAGGCGGTCAATGAACCACCACC 247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192056792828006
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |