Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq25290 96.9 8e-15 seq10106 91.5 4e-13 >seq25290 Length=1416 Score = 96.9 bits (106), Expect = 8e-15 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| ||| || || ||||||||||| |||||||||||||| | | || || ||||| | Sbjct 697 ATACTTCTGGGTGTCCAAAAAATCAAAATAAATGTTGATATAAAACTGGGTCTCCTCCTC 638 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 || |||||||||||| |||||| ||||||| ||||||||| Sbjct 637 CTATTGGATCAAAAAATGAAGTATTTAAATTTCGATCAGTTAA 595 >seq10106 Length=1307 Score = 91.5 bits (100), Expect = 4e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||| || ||||| || || || ||||| ||||| || ||||| || |||||||| Sbjct 351 GAAGATTTGTCCGTCAGTGATGGAAATCACATTGGTAGGAATGTAAGCGGACACATCACC 292 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574 ||||||||||| | || || ||||| || | ||| |||||||| Sbjct 291 AGCTTGTGTTTCAATCACGGGCAAGGCGGTCAATGAACCACCACC 247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192056792828006