Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_031010.1
Length=246390
Score E
Sequences producing significant alignments: (Bits) Value
seq4032 87.8 3e-12
seq1262 86.0 1e-11
>seq4032
Length=2654
Score = 87.8 bits (96), Expect = 3e-12
Identities = 56/61 (92%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 3259 TTAGTTCAGTCGGTAGAACAGTGGACTGTTAATCCATATGTCGCAGGTTCGATTCCTGCA 3318
|||||||||| |||||||| ||||||||||||||||||||||||| |||||| || ||||
Sbjct 1304 TTAGTTCAGTTGGTAGAACGGTGGACTGTTAATCCATATGTCGCAAGTTCGAGTCTTGCA 1363
Query 3319 T 3319
|
Sbjct 1364 T 1364
Score = 87.8 bits (96), Expect = 3e-12
Identities = 56/61 (92%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 3259 TTAGTTCAGTCGGTAGAACAGTGGACTGTTAATCCATATGTCGCAGGTTCGATTCCTGCA 3318
|||||||||| |||||||| ||||||||||||||||||||||||| |||||| || ||||
Sbjct 1567 TTAGTTCAGTTGGTAGAACGGTGGACTGTTAATCCATATGTCGCAAGTTCGAGTCTTGCA 1626
Query 3319 T 3319
|
Sbjct 1627 T 1627
>seq1262
Length=72559
Score = 86.0 bits (94), Expect = 1e-11
Identities = 55/60 (92%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 3259 TTAGTTCAGTCGGTAGAACAGTGGACTGTTAATCCATATGTCGCAGGTTCGATTCCTGCA 3318
|||||||||| |||||||| |||||||||||||||||||||||| ||||||| ||| |||
Sbjct 60812 TTAGTTCAGTTGGTAGAACGGTGGACTGTTAATCCATATGTCGCTGGTTCGAGTCCAGCA 60753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 788014043154000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |