Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_031019.1
Length=41809
Score E
Sequences producing significant alignments: (Bits) Value
seq6609 125 2e-24
>seq6609
Length=13971
Score = 125 bits (138), Expect = 2e-24
Identities = 189/269 (70%), Gaps = 0/269 (0%)
Strand=Plus/Plus
Query 29137 TAAATTCTACCAATATATTCTCCAAGAATACCTATTCCTATCAATTGAACGCCACCCAGG 29196
|| ||||| || ||||||||||| | | |||| |||||| ||||| | ||||| |
Sbjct 5650 TATATTCTTCCTATATATTCTCCCATTACTCCTAATCCTATTAATTGTATTCCACCTATA 5709
Query 29197 AAAAGAACAGAAACAAGAAGAGACGGGTAGCCAGGAACATTATTTCCAAATATTAATTTA 29256
|| || | |||| | |||||| || |||| || |||||||||||||| | ||||
Sbjct 5710 AATGTAATTGCTACAAATAAAGACGGATAACCAGCAATATTATTTCCAAATAACATTTTA 5769
Query 29257 TCAATAATCATCCATGCACCGTAAAGGAATGACATACCTGCAATAAACAATCCAATGTAA 29316
|| ||||| || || ||| || || ||| || || || ||||| ||||||
Sbjct 5770 TCTATAATTATTTTAAATCCAAAAATAAAAGAAATAGAGGCCATTAAAAATCCGATGTAA 5829
Query 29317 GTCCATATGCGGAGCGGAAATGTTGAGAAAGAAGTTATTCCCTCCAGCGCCAGGTTCCAT 29376
|||||| | || |||| ||| || ||||||||||| || | ||||| ||||||
Sbjct 5830 CACCATATTCTAAGTGGAATTGTGCTAAATGAAGTTATTCCTTCTACCGCCAAATTCCAT 5889
Query 29377 AATTTCCAGCCGTTGAATTTCGAATCACC 29405
|| ||||| | || ||||| | |||||
Sbjct 5890 AACTTCCATGCATTAAATTTTGTTTCACC 5918
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133617915984398
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |