Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_031045.1
Length=157855
Score E
Sequences producing significant alignments: (Bits) Value
seq1262 105 7e-18
seq2410 104 2e-17
>seq1262
Length=72559
Score = 105 bits (116), Expect = 7e-18
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand=Plus/Minus
Query 19041 GGCCCCGTAGCTCAGT-GGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAG 19099
|||||| ||||||||| |||||||||| ||||||||||||| | |||||||||||||||
Sbjct 63894 GGCCCCTTAGCTCAGTTGGTTAGAGCACACGACTCATAATCGTTAGGTCGCTGGTTCAAG 63835
Query 19100 TCCAGCCAGGGTCACCACTAAATAA 19124
|||||| ||| ||||| |||||||
Sbjct 63834 TCCAGCAGGGGCCACCAATAAATAA 63810
Score = 84.2 bits (92), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 1/66 (2%)
Strand=Plus/Minus
Query 19041 GGCCCCGTAGCTCAGT-GGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAG 19099
||| || ||||||||| |||||||||| ||||||||||||| | |||||||||||||||
Sbjct 64479 GGCTCCTTAGCTCAGTTGGTTAGAGCACACGACTCATAATCGTTAGGTCGCTGGTTCAAG 64420
Query 19100 TCCAGC 19105
||||||
Sbjct 64419 TCCAGC 64414
>seq2410
Length=3205
Score = 104 bits (114), Expect = 2e-17
Identities = 74/84 (88%), Gaps = 1/84 (1%)
Strand=Plus/Plus
Query 19042 GCCCCGTAGCTCAGT-GGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAGT 19100
||||| ||||||||| |||||||||| ||||||||||||| | ||||||||||||||||
Sbjct 951 GCCCCTTAGCTCAGTTGGTTAGAGCAAACGACTCATAATCGTTAGGTCGCTGGTTCAAGT 1010
Query 19101 CCAGCCAGGGTCACCACTAAATAA 19124
||||| ||| ||||| |||||||
Sbjct 1011 CCAGCAGGGGCCACCAATAAATAA 1034
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 19034 AAATTTTGGCCCCGTAGCTCAGT-GGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTG 19092
||| || | |||| ||||||||| |||||||||| ||||||||||||| | ||||||||
Sbjct 1774 AAAGTTAGCCCCCTTAGCTCAGTTGGTTAGAGCACACGACTCATAATCGTTAGGTCGCTG 1833
Query 19093 GTTCAAGTCCAGC 19105
|||||||||||||
Sbjct 1834 GTTCAAGTCCAGC 1846
Score = 84.2 bits (92), Expect = 2e-11
Identities = 66/78 (85%), Gaps = 1/78 (1%)
Strand=Plus/Plus
Query 19040 TGGCCCCGTAGCTCAGT-GGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAA 19098
|| |||| ||||||||| |||||||||| ||||||||||||| ||||||||||||||
Sbjct 2301 TGCCCCCTTAGCTCAGTTGGTTAGAGCATACGACTCATAATCGTCAGGTCGCTGGTTCAA 2360
Query 19099 GTCCAGCCAGGGTCACCA 19116
||||||| | | |||||
Sbjct 2361 GTCCAGCAGGAGGCACCA 2378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 504812000082600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |