Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_031128.1 Length=158081 Score E Sequences producing significant alignments: (Bits) Value seq4032 87.8 2e-12 >seq4032 Length=2654 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 102150 AAAGACGATGTAGTTCAGTCGGTAGAACGGCGGTCTGTTAAACCGTATGTCGCAGGTTCA 102209 |||||| | ||||||||| |||||||||| || ||||||| || ||||||||| |||| Sbjct 1295 AAAGACCTTTTAGTTCAGTTGGTAGAACGGTGGACTGTTAATCCATATGTCGCAAGTTCG 1354 Query 102210 AGTCCTGCCATCGTCGCCAAATAATA 102235 |||| ||| |||||||||||||| Sbjct 1355 AGTCTTGCATGGGTCGCCAAATAATA 1380 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 102150 AAAGACGATGTAGTTCAGTCGGTAGAACGGCGGTCTGTTAAACCGTATGTCGCAGGTTCA 102209 |||||| | ||||||||| |||||||||| || ||||||| || ||||||||| |||| Sbjct 1558 AAAGACCTTTTAGTTCAGTTGGTAGAACGGTGGACTGTTAATCCATATGTCGCAAGTTCG 1617 Query 102210 AGTCCTGCCATCGTCGCCAAATAATA 102235 |||| ||| |||||||||||||| Sbjct 1618 AGTCTTGCATGGGTCGCCAAATAATA 1643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505534919399640