Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_031229.1 Length=76972 Score E Sequences producing significant alignments: (Bits) Value seq4032 86.0 3e-12 >seq4032 Length=2654 Score = 86.0 bits (94), Expect = 3e-12 Identities = 55/59 (93%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 20141 TAGCTCAATTCGGCAGAGCGCCCGACTGTTAATCGGGTGGTTGTAGGTTCAAGTCCTAC 20199 ||||||||| ||| ||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 1222 TAGCTCAAT-CGGTAGAGCGCACGACTGTTAATCGGATGGTTGTAGGTTCAAGTCCTAC 1279 Score = 86.0 bits (94), Expect = 3e-12 Identities = 55/59 (93%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 20141 TAGCTCAATTCGGCAGAGCGCCCGACTGTTAATCGGGTGGTTGTAGGTTCAAGTCCTAC 20199 ||||||||| ||| ||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 1485 TAGCTCAAT-CGGTAGAGCGCACGACTGTTAATCGGATGGTTGTAGGTTCAAGTCCTAC 1542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 246092440984037