Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_031902.1 Length=125114 Score E Sequences producing significant alignments: (Bits) Value seq2698 84.2 2e-11 >seq2698 Length=11445 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/113 (78%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 28909 TAATAACGTCGTTCTGTTGTTCACGCGTCAATGCGTTAAATCGAACAGCATAGCCAGAGA 28968 ||||||| || | ||||||||| | || || | |||||||| ||||||||| || || | Sbjct 5480 TAATAACATCTTGTTGTTGTTCAGGTGTTAAAGAGTTAAATCTAACAGCATATCCTGAAA 5421 Query 28969 CACGGATGGTCAACTGAGGATATTTTTCAGGATGTTTCTGC-GCATCCAAAAG 29020 | | || || ||||| || |||||||||||||| |||| | ||||| | ||| Sbjct 5420 CCCTAATTGTTAACTGCGGGTATTTTTCAGGATG-TTCTACTGCATCAAGAAG 5369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 400088545306675