Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq2410 84.2 3e-11 >seq2410 Length=3205 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/146 (74%), Gaps = 6/146 (4%) Strand=Plus/Plus Query 18970 TTAGCTCAGCTGGATAGAGCAACGGTTTTGTAAACCGTAGGTCGTCGGTTCAAGTCCGAC 19029 ||||||||| ||||||||||||| | || ||| | ||||||| | ||||| | ||| | Sbjct 879 TTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCATAGGTTCGAATCCTAT 938 Query 19030 ATCAGGCTCTCACATTCCTCCTTAGTTCAG--CGGTAGAACGAACGACTGTTAATCGTTA 19087 | ||| | ||| | |||||| |||| | |||| | ||||||| ||||||||| Sbjct 939 A-CAGCGTACCAC---GCCCCTTAGCTCAGTTGGTTAGAGCAAACGACTCATAATCGTTA 994 Query 19088 AGTCCCTGGTTCGATCCCAGGAGGGG 19113 ||| ||||||| | |||| ||||| Sbjct 995 GGTCGCTGGTTCAAGTCCAGCAGGGG 1020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591968560398480