Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq12187 208 8e-49
>seq12187
Length=3570
Score = 208 bits (230), Expect = 8e-49
Identities = 374/542 (69%), Gaps = 6/542 (1%)
Strand=Plus/Minus
Query 23491 AAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAAT 23550
|||| || |||| ||||| ||||| |||||||| | |||||| || | |||||
Sbjct 1569 AAATGTTTGAACATCAAACAGGCAAAGTCACAATGCAAGCCTTCGTCACGTGAAATCAGC 1510
Query 23551 TCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCA 23610
||||| || ||||| | || ||||| | || ||||| |||| ||| || || | ||
Sbjct 1509 TCATTGGAGAATGTCAGGCCAGGCATGAGACCACGTTTCTTAAGCCAGAAAATAGAGGCG 1450
Query 23611 AATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAAT 23670
|| || |||||||||||||||||||| ||||| || | || ||| ||||||
Sbjct 1449 AAACTGCCACTGAAGAAAATACCCTCAACAGCTGCAAATGCTATAATACGCTCACCAAAA 1390
Query 23671 GTTGC--ATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACA-CAC 23727
| || ||| || ||| |||| | | ||||| ||||||| || ||| ||
Sbjct 1389 TTGGCCGATTTCGATGAGA--TCCAGGCCATGGCCCAATCAGCCTTCTTCTTAACAGCAG 1332
Query 23728 TCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTA 23787
|| |||||||| || || || |||||| || || | || ||| || ||
Sbjct 1331 GCAGC-GTTTCAATGGCGTTAAATAGAAAATCACGTTGTTTTGTGTCACGTATGTAGGTG 1273
Query 23788 TCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAA 23847
||||| | | || ||||||||||| || | |||||| || ||||| || || ||||||
Sbjct 1272 TCAATCAAAATGCTGTACATTTCAGAGTGCACATTTTCCATGGCAATTTGGAAACCATAA 1213
Query 23848 AAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTA 23907
||||| | || |||| | ||| || || | || | | | |||||||| ||
Sbjct 1212 AAACAACGCGCCTCAGTTATTTGTACTTCTTGGCTGAAACGCTCTACCAAATTTTCATTG 1153
Query 23908 ACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA 23967
||||| |||||| || || || || || | ||||| ||||||||| || |||| |
Sbjct 1152 ACAATGCCATCAGAGGCGGCGAAAAATGCCAAAACATGCGATATAAAATGCCTCTCATTA 1093
Query 23968 GTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAA 24027
|| ||||||| ||| ||||| ||||| || ||||||| ||||| || |||||||||
Sbjct 1092 TCTGTCAATTTTTCCCAGTCATTCATATCCTTGCATAAATCCACTTCCTCCACTGTCCAA 1033
Query 24028 AA 24029
||
Sbjct 1032 AA 1031
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521285603988600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |