Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq12187 208 8e-49 >seq12187 Length=3570 Score = 208 bits (230), Expect = 8e-49 Identities = 374/542 (69%), Gaps = 6/542 (1%) Strand=Plus/Minus Query 23491 AAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAAT 23550 |||| || |||| ||||| ||||| |||||||| | |||||| || | ||||| Sbjct 1569 AAATGTTTGAACATCAAACAGGCAAAGTCACAATGCAAGCCTTCGTCACGTGAAATCAGC 1510 Query 23551 TCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCA 23610 ||||| || ||||| | || ||||| | || ||||| |||| ||| || || | || Sbjct 1509 TCATTGGAGAATGTCAGGCCAGGCATGAGACCACGTTTCTTAAGCCAGAAAATAGAGGCG 1450 Query 23611 AATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAAT 23670 || || |||||||||||||||||||| ||||| || | || ||| |||||| Sbjct 1449 AAACTGCCACTGAAGAAAATACCCTCAACAGCTGCAAATGCTATAATACGCTCACCAAAA 1390 Query 23671 GTTGC--ATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACA-CAC 23727 | || ||| || ||| |||| | | ||||| ||||||| || ||| || Sbjct 1389 TTGGCCGATTTCGATGAGA--TCCAGGCCATGGCCCAATCAGCCTTCTTCTTAACAGCAG 1332 Query 23728 TCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTA 23787 || |||||||| || || || |||||| || || | || ||| || || Sbjct 1331 GCAGC-GTTTCAATGGCGTTAAATAGAAAATCACGTTGTTTTGTGTCACGTATGTAGGTG 1273 Query 23788 TCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAA 23847 ||||| | | || ||||||||||| || | |||||| || ||||| || || |||||| Sbjct 1272 TCAATCAAAATGCTGTACATTTCAGAGTGCACATTTTCCATGGCAATTTGGAAACCATAA 1213 Query 23848 AAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTA 23907 ||||| | || |||| | ||| || || | || | | | |||||||| || Sbjct 1212 AAACAACGCGCCTCAGTTATTTGTACTTCTTGGCTGAAACGCTCTACCAAATTTTCATTG 1153 Query 23908 ACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA 23967 ||||| |||||| || || || || || | ||||| ||||||||| || |||| | Sbjct 1152 ACAATGCCATCAGAGGCGGCGAAAAATGCCAAAACATGCGATATAAAATGCCTCTCATTA 1093 Query 23968 GTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAA 24027 || ||||||| ||| ||||| ||||| || ||||||| ||||| || ||||||||| Sbjct 1092 TCTGTCAATTTTTCCCAGTCATTCATATCCTTGCATAAATCCACTTCCTCCACTGTCCAA 1033 Query 24028 AA 24029 || Sbjct 1032 AA 1031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521285603988600