Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq4354 123 3e-23
>seq4354
Length=2790
Score = 123 bits (136), Expect = 3e-23
Identities = 226/329 (69%), Gaps = 4/329 (1%)
Strand=Plus/Plus
Query 155730 CGACTCAACGCCGTCGATTGAGCGGCGCGTACCAACCCTTCCAATTCAGCGCCGCTGTAA 155789
||| ||| || || ||||| || || || ||||| || |||||||| || || ||| ||
Sbjct 1009 CGATTCATGGCTGTGGATTGGGCAGCACGCACCAAACCCTCCAATTCTGCACCACTGAAA 1068
Query 155790 TTTTTAGTTTCAA--CGGCTATTTTATTTAAGTCTACGTCGGAAGCTAATATGTTGTGAG 155847
|| || || ||| | || || | || ||||||| || | || ||| |||||| |
Sbjct 1069 TTCTTTGT--CAATTCTGCAATCTCCTTGCAGTCTACATCTGGTGCCAATTTGTTGTAAT 1126
Query 155848 ATTTCATTTTAGCAACGTGCACCTTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAATC 155907
||| ||| || | || | |||||| | || |||| ||||| ||| || |
Sbjct 1127 CACGCATGCGCGCAGTATGTATGTTGAGAATTTGCACTCGTCCCTGTTCATTGGGCAAGC 1186
Query 155908 CAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGG 155967
|||||| || | || ||| || || ||||| | | || || |||||||| | |||
Sbjct 1187 TAATTTCCATTTGCACTTCTAAACGACCAGGACGCATCAAGGCATCGTCAATCATGTCAC 1246
Query 155968 GTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGATTCTACACCGTCTATTTTAG 156027
| | || ||||| || || | ||||| || || || ||| ||||| || |||||||
Sbjct 1247 GACGATTTGTCATGCCAATAACCAAAATATTATTCAATTGTTCGACACCATCGATTTTAG 1306
Query 156028 ACAATAATTGATTGACTACGGCGTCGTGC 156056
||| ||||||||||| || | ||| |||
Sbjct 1307 CCAACAATTGATTGACAACAGTGTCATGC 1335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 666816299776440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |