Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq600855 109 4e-19 >seq600855 Length=4662 Score = 109 bits (120), Expect = 4e-19 Identities = 236/350 (67%), Gaps = 10/350 (3%) Strand=Plus/Minus Query 101750 TTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACT 101809 || || ||| ||| | |||||| || || |||| |||||| || | |||||||| || Sbjct 2591 TTTGTAACAGCAGCTAACATGCATGTCAATAGAGCATAGCTGGCTACATTAAATGGAACA 2532 Query 101810 CCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACA 101869 || | |||||||| ||||||||||| || || || || || |||| |||| ||| Sbjct 2531 CCAAGTCCCATATCTGCTGATCTTTGGTATAGCTGGCATGACAGCTCCCCATTTGCTACA 2472 Query 101870 TAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGG----AATGTC-TGAAA 101924 |||||||| || ||| ||||| |||| ||| | ||| ||| || || Sbjct 2471 TAAAATTGTACCAAGCAATGGCAAGGGGGCAGAGCCA--TAAGGCCCAAATCTCGTG--- 2417 Query 101925 CATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCA 101984 ||||| |||||||| | || | | ||| || ||||| || || | |||| Sbjct 2416 GGTTCCACGCACACATGATGATGCGGCGATCATCTGGATTTGTGCGTAGTGTGTGTATCA 2357 Query 101985 ACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTG 102044 || | | ||| ||||| |||| || | ||| | | || |||| || |||| Sbjct 2356 CATGCTGAAGTTGATCAACACCTTTGCCCTCATAGTTGGAATCAGTTCCTTCGTAATCTG 2297 Query 102045 CTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCA 102094 |||| || || | ||||||||| |||||||| || ||||| || ||| || Sbjct 2296 CTCCAAAGTGGCGCCACTGAAAACCATACACTGGACCAAGGTCACCTGCA 2247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355098393494492