Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq741633 105 6e-18
seq708045 95.1 1e-14
seq1341392 87.8 2e-12
seq831174 82.4 6e-11
>seq741633
Length=11487
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| |||||| | || ||| | || || |||||||| || ||| || | |
Sbjct 8127 ATGCAGATATTCGTTAAGACACTAACTGGTAAAACCATCACATTGGAAGTAGAGGCATCT 8186
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | || | ||| |||||| ||||| ||||| | || |||||
Sbjct 8187 GATACAATTGAGAATGTGAAGGCGAAAATTCAGGATAAGGAAGGGATCCCACCTGATCAG 8246
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|| ||||| || ||||| ||||||||||| |||||| | |||| | | |||||||||
Sbjct 8247 CAGAGACTGATTTTTGCTGGCAAACAACTCGAAGATGGGAGAACTCTATCTGATTACAAT 8306
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189
||||||||||||||||| || ||| |||| || | || || || |||
Sbjct 8307 ATTCAGAAGGAATCTACCCTGCACCTGGTATTGAGGTTGCGTGGTGGG 8354
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| || || | || |||||||||||||| || || || || ||| | ||
Sbjct 9324 ATGCAGATCTTTGTGAAGACATTGACGGGCAAGACTATAACTTTGGATGTTGAAGCTTCA 9383
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | || ||||| ||||||| ||||| ||||| | || || |||
Sbjct 9384 GATACAATTGAGAATGTTAAGGCAAAAATTCAGGATAAGGAAGGAATACCACCTGACCAA 9443
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|| || || |||||||| ||||| |||||||||||| || || | ||||||||
Sbjct 9444 CAGAGGCTAATCTTTGCAGGCAAGCAACTGGAAGATGGACGTACCCTGTCTGATTACAAC 9503
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|||||||| ||||| ||| | || ||||| | |||| ||||| ||
Sbjct 9504 ATTCAGAAAGAATCCACTTTGCATCTGGTGCTGAGATTGCGAGGTGG 9550
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| || || | || || | || ||||| ||||| || ||| |||| | ||
Sbjct 8640 ATGCAGATTTTTGTAAAGACCCTCACAGGCAAGACCATCACACTGGAAGTGGAAGCTTCA 8699
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | || | ||| ||| || || |||||||| | || ||| ||
Sbjct 8700 GACACAATTGAAAATGTGAAGGCAAAGATCCAGGACAAAGAAGGAATTCCACCAGACCAG 8759
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
||| | || || ||||| || || || ||||||||| | ||| || | |||||||||
Sbjct 8760 CAACGTCTCATTTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACTCTGTCTGATTACAAT 8819
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|||||||||||||| ||||| || ||||||| | || ||||||||
Sbjct 8820 ATTCAGAAGGAATCGACTCTCCATCTGGTGTTGAGGTTGCGAGGAGG 8866
Score = 93.3 bits (102), Expect = 4e-14
Identities = 105/139 (76%), Gaps = 4/139 (3%)
Strand=Plus/Plus
Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114
||||| ||||| | ||| ||||||||| |||| |||||||| |||||||| |||||
Sbjct 11241 GATAAGGAAGGCATTCCCCCAGATCAACAGCGACTCATCTTTGCAGGCAAACAGTTGGAA 11300
Query 29115 GATT--CCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGT 29172
||| | | ||| | | || || ||||||||||| ||||| |||||||| |||||
Sbjct 11301 GATGGACGTACACTTTCG--GACTATAATATTCAGAAAGAATCCACTCTTCATTTGGTGC 11358
Query 29173 TACGATTACGAGGAGGGTA 29191
|||| || |||| || ||
Sbjct 11359 TACGTTTGAGAGGTGGATA 11377
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| || ||| | || || | || || |||||||||||| ||| ||| | |
Sbjct 10920 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAAACCATTACCTTGGAAGTGGAGGCGTCG 10979
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | || | ||| || || || |||||||| | || ||||||
Sbjct 10980 GACACCATTGAGAATGTGAAGGCGAAGATCCAGGACAAAGAAGGGATTCCTCCAGATCAG 11039
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
||| | || |||||||| ||||| || || |||||| || || | ||||||||
Sbjct 11040 CAACGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGACGCACCCTGTCAGATTACAAC 11099
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|||||||||||||||||||| || ||||| || | || || || ||
Sbjct 11100 ATTCAGAAGGAATCTACTCTGCATCTGGTGCTAAGGTTGCGCGGTGG 11146
Score = 82.4 bits (90), Expect = 6e-11
Identities = 101/136 (74%), Gaps = 4/136 (3%)
Strand=Plus/Plus
Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114
||||| |||||| | || ||| ||||| || || ||||| || || || ||||| |||
Sbjct 7992 GATAAGGAAGGTATTCCACCAGACCAACAGAGGCTGATCTTCGCAGGGAAGCAACTCGAA 8051
Query 29115 GAT--TCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGT 29172
||| || | ||| | | |||||||| ||||||||||||||||| || || ||||
Sbjct 8052 GATGGTCGTACACTGT--CTGATTACAACATTCAGAAGGAATCTACCCTCCATTTGGTAC 8109
Query 29173 TACGATTACGAGGAGG 29188
|| |||| |||| ||
Sbjct 8110 TAAGATTGAGAGGTGG 8125
Score = 82.4 bits (90), Expect = 6e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114
||||| ||||| | || ||||| || |||||||| ||||| || || ||| | |||
Sbjct 8505 GATAAGGAAGGGATCCCACCTGATCAGCAGAGACTTATATTTGCAGGAAAGCAATTAGAA 8564
Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174
||| | ||| || | || || || ||||| |||||||||||||||||| | ||| |
Sbjct 8565 GATGGCCGTACTTTGTCAGACTATAACATTCAAAAGGAATCTACTCTTCACCTTGTGCTC 8624
Query 29175 CGATTACGAGGAGGG 29189
|| | ||||||||
Sbjct 8625 AGACTTAGAGGAGGG 8639
>seq708045
Length=25632
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018
|||||||| ||||| | || || |||||||| || || || ||| || ||| |
Sbjct 10388 AAAATGCAGATATTTGTGAAGACTTTGACGGGGAAGACTATCACCTTAGAGGTAGAAGCT 10447
Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078
| || || | | || |||| ||||| ||||||||||| | ||| |||
Sbjct 10448 TCGGATACAATTGAAAATGTTAAAGCCAAAATCCAGGATAAAGAAGGAATTCCCCCGGAT 10507
Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138
|| || ||||| || ||||| ||||| || |||||||| | ||| || | |||||
Sbjct 10508 CAGCAGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAACATTGTCTGATTAT 10567
Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||||| ||||| ||||||||| | ||| | |||||| || | || || ||
Sbjct 10568 AATATCCAGAAAGAATCTACTTTACACCTTGTGTTAAGACTCCGTGGTGG 10617
>seq1341392
Length=603
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| ||||| | || || | || ||||| ||||| || ||| ||| || ||
Sbjct 281 ATGCAGATATTTGTAAAGACCCTCACAGGCAAGACCATAACATTGGAAGTTGAAGCCTCA 340
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | || | ||| || ||| ||||| ||||| | || |||||||
Sbjct 341 GACACTATAGAAAATGTCAAGGCGAAGATTCAGGATAAGGAAGGCATTCCACCAGATCAA 400
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139
|| || || ||||| || || || ||||| |||||| || | ||| | | |||||||
Sbjct 401 CAGAGGCTGATCTTCGCAGGGAAGCAACTCGAAGATGGTCGTACACTGT--CTGATTACA 458
Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
| ||||||||||||||||| || || |||| || |||| |||| ||
Sbjct 459 ACATTCAGAAGGAATCTACCCTCCATTTGGTACTAAGATTGAGAGGTGG 507
>seq831174
Length=18794
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018
|||||||| ||||| | || | |||||||| || || || ||| || ||| |
Sbjct 4108 AAAATGCAGATATTTGTGAAGAATTTGACGGGGAAGACTATCACCTTAGAGGTAGAAGCT 4167
Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078
| || || | | || |||| ||||| ||||||||||| | ||| |||
Sbjct 4168 TCGGATACAATTGAAAATGTTAATGCCAAAATCCAGGATAAAGAAGGAATTCCCACGGAT 4227
Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138
|| || ||||| || ||||| ||||| || |||||||| | ||| || | |||||
Sbjct 4228 CAGCAGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAACATTGTCTGATTAT 4287
Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173
||||| ||||| |||||||| | ||| | |||||
Sbjct 4288 AATATCCAGAAATAATCTACTTTACACCTTGTGTT 4322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421040609625260
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |