Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq741633 125 6e-24 seq302910 98.7 8e-16 seq708045 89.7 4e-13 >seq741633 Length=11487 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || |||||||| ||||||| ||||||||| || ||||| |||||||| || |||| | Sbjct 9778 CCACCACGCAGCCTCAGCACCAGATGCAAAGTAGATTCCTTCTGAATGTTGTAATCCGAC 9719 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| | | || ||||| || || || ||| | || || | ||||||||| || Sbjct 9718 AGGGTTCGTCCATCTTCCAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCTGGAGGA 9659 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| ||||||| ||||| | | | ||| || | || Sbjct 9658 ATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTTTCAATAGTGTCTGAAGCTTCTACC 9599 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| |||||| |||||||| || | || || ||||| || ||||| Sbjct 9598 TCCAGGGTAATTGTCTTGCCAGTAAGGGTCTTCACAAAAATCTGCAT 9552 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || |||||||| ||||||| |||||||||||| ||||| |||||||| || || | | Sbjct 10918 CCACCACGCAGCCTCAGCACCAGATGCAAAGTGGATTCCTTCTGAATGTTGTAATCTGAC 10859 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| | | || |||||||| ||||| || | || || | |||||||| || Sbjct 10858 AGGGTTCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGA 10799 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| ||||| |||||| ||||| | | | || || | |||| | Sbjct 10798 ATACCTTCTTTGTCTTGTATCTTTGCCTTCACATTCTCAATGGTGTCTGAAGCCTCCACT 10739 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||| |||||||| || | || || ||||| || ||||| Sbjct 10738 TCCAATGTAATTGTCTTGCCTGTAAGTGTCTTCACAAAAATCTGCAT 10692 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||||| ||| ||||||| ||||||||||||||| || ||||| || ||||| | Sbjct 10006 CCACCTCGCAACCTTAGCACCAGATGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAT 9947 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | || || ||||| ||||| ||| | || || | |||||||| || Sbjct 9946 AGGGTCCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCTGGAGGA 9887 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| || || |||||| |||||| | ||| || || | ||| | Sbjct 9886 ATACCTTCTTTATCCTGGATCTTCGCTTTCACATTTTCGATGGTGTCTGAAGCTTCCACT 9827 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||||||| || || || | || || ||||| || ||||| Sbjct 9826 TCCAGGGTAATGGTTTTTCCAGTAAGTGTCTTCACAAAGATCTGCAT 9780 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || |||||||| ||||| | |||||||||||| ||||| |||||||| || || | Sbjct 10690 CCTCCACGCAGCCTCAGCACTAAATGCAAAGTGGATTCCTTCTGAATGTTGTAATCAGAT 10631 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | || || ||||| ||||| ||| | || || | ||| ||||| || Sbjct 10630 AAGGTCCTTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGAGGG 10571 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||| || || ||||| |||||| | | | || ||| | ||| | Sbjct 10570 ATGCCTTCTTTATCTTGAATCTTAGCTTTCACATTTTCAATTGTGTCAGATGCCTCAACT 10511 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| ||||| || ||||| || | || || ||||| ||||||||| Sbjct 10510 TCCAATGTAATTGTTTTGCCAGTAAGTGTCTTCACAAAAATTTGCATT 10463 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||||| ||| | ||||| ||| | ||| || ||||| ||||| || || || | | Sbjct 8866 CCTCCTCGCAACCTCAACACCAGATGGAGAGTCGATTCCTTCTGAATATTGTAATCAGAC 8807 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | || |||||||| || || ||| |||| || | |||||||| || Sbjct 8806 AGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATGAGACGTTGCTGGTCTGGTGGA 8747 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| ||||| ||||||| ||||| | | | || || | ||| | Sbjct 8746 ATTCCTTCTTTGTCCTGGATCTTTGCCTTCACATTTTCAATTGTGTCTGAAGCTTCCACT 8687 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || ||||||||||| || | || || ||||| || ||||| Sbjct 8686 TCCAGTGTGATGGTCTTGCCTGTGAGGGTCTTTACAAAAATCTGCAT 8640 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| |||| ||||| || |||| ||||| ||| || |||||||| ||||| || || | Sbjct 10464 TTCCACCTCTTAGCCTCAGAACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAATCTG 10405 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | ||| | || |||| |||||| || ||| | || |||| ||| || || | Sbjct 10404 ATAAGGTCCTTCCATCTTCCAACTGTTTTCCTGCAAAGATGAGTCGCTGTTGATCTGGAG 10345 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | |||||||||||| ||||||| ||| || | | | || ||| | ||| Sbjct 10344 GAATGCCTTCCTTGTCTTGGATCTTTGCTTTGACATTCTCAATGGTGTCAGAAGCTTCCA 10285 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||| |||||||| || | || || ||||| || ||||| Sbjct 10284 CCTCCAGAGTAATTGTCTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 10236 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| |||| || | ||||||| ||| | |||||| || || ||||| |||||||||| Sbjct 11375 TCCACCTCTCAAACGTAGCACCAAATGAAGAGTGGATTCTTTCTGAATATTATAGTCCGA 11316 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 || || | | || |||| ||||||||| ||| | || |||| ||| || || ||| Sbjct 11315 AAGTGTACGTCCATCTTCCAACTGTTTGCCTGCAAAGATGAGTCGCTGTTGATCTGGGGG 11256 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | ||||||||| || ||| || ||||| | | | || || | ||| Sbjct 11255 AATGCCTTCCTTATCTTGGATTTTCGCCTTCACATTCTCAATTGTGTCGGAAGCTTCCAC 11196 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||||||||| ||||| | || || ||||| || ||||| Sbjct 11195 CTCCAGAGTAATGGTCTTCCCGGTAAGAGTCTTCACAAAAATCTGCAT 11148 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||||| || ||||||| |||||||||||| || || |||||||| || || | | Sbjct 9550 CCACCTCGCAATCTCAGCACCAGATGCAAAGTGGATTCTTTCTGAATGTTGTAATCAGAC 9491 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | || ||||| || ||||| ||| | || || ||||| ||||| || Sbjct 9490 AGGGTACGTCCATCTTCCAGTTGCTTGCCTGCAAAGATTAGCCTCTGTTGGTCAGGTGGT 9431 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||| || || ||| || || | | | ||||| | || Sbjct 9430 ATTCCTTCCTTATCCTGAATTTTTGCCTTAACATTCTCAATTGTATCTGAAGCTTCAACA 9371 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || |||||||| || || || || ||||| || ||||| Sbjct 9370 TCCAAAGTTATAGTCTTGCCCGTCAATGTCTTCACAAAGATCTGCAT 9324 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || |||| ||| || || | ||||| ||| || ||||| ||||| ||||| || | | Sbjct 10234 CCACCACGCAACCTCAGGACAAGATGCAGAGTAGATTCCTTCTGAATATTATAATCAGAC 10175 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | || |||||||| || || ||| | || | |||||||||||| || Sbjct 10174 AAGGTCCGCCCATCTTCCAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGCGGA 10115 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||| || || |||||| ||| || | | | ||||| | || | Sbjct 10114 ATGCCTTCTTTATCCTGGATCTTCGCTTTTACATTCTCTATGGTATCGGATGCTTCTACT 10055 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||| || || || || || ||||| |||||||| ||||| Sbjct 10054 TCTAATGTAATAGTTTTTCCAGTCAAGGTTTTCACAAATATCTGCAT 10008 >seq302910 Length=12142 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || ||||| || |||| ||| || |||||||| || ||||| || ||||| | Sbjct 3966 CCACCACGAAGCCTTAGAACCAAATGTAATGTGGACTCTTTCTGAATATTGTAGTCAGAT 4025 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | || |||| ||||| || ||| ||||||| ||||||||||| || Sbjct 4026 AAAGTACGCCCATCTTCCAATTGTTTTCCAGCAAAAATAAGCCTCTGCTGGTCTGGTGGA 4085 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| ||||| ||| || ||||| | | | |||||| || || | Sbjct 4086 ATTCCTTCTTTGTCTTGGATTTTGGCCTTCACATTTTCAATAGTATCTGATGGTTCAACT 4145 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || || || || ||||| || |||||||| |||||||| Sbjct 4146 TCCAGTGTTATTGTTTTACCTGTTAATGTCTTGACAAAAATTTGCAT 4192 >seq708045 Length=25632 Score = 89.7 bits (98), Expect = 4e-13 Identities = 167/244 (68%), Gaps = 1/244 (0%) Strand=Plus/Minus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| || || || || | ||| | || ||||| || || || || || ||||| || | Sbjct 10618 TCCACCACGGAGTCTTAACACAAGGTGTAAAGTAGATTCTTTCTGGATATTATAATCAGA 10559 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 || ||| || | || |||| ||| ||||| ||| | || ||||||||||| ||| ||| Sbjct 10558 CAATGTTCGGCCATCTTCCAACTGCTTGCCAGCAAATATCAGTCTCTGCTGATCCGGGGG 10499 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | ||||| || || ||| || ||| || | | | ||||| | || Sbjct 10498 AATTCCTTCTTTATCCTGGATTTTGGCTTTAACATTTTCAATTGTATCCGAAGCTTCTAC 10439 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAATCTCTT 21187 || | ||| || ||||| || || || || || |||||||| ||||||||| || |||| Sbjct 10438 CTCTAAGGTGATAGTCTTCCCCGTCAAAGTCTTCACAAATATCTGCATTTTG-ATTTCTT 10380 Query 21188 ATAA 21191 |||| Sbjct 10379 ATAA 10376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415067309280272