Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq741633 96.9 3e-15
seq708045 91.5 1e-13
seq302911 86.0 5e-12
seq1341392 84.2 2e-11
seq238538 82.4 6e-11
>seq741633
Length=11487
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| |||||| | || ||| | || || |||||||| || ||| || | |
Sbjct 8127 ATGCAGATATTCGTTAAGACACTAACTGGTAAAACCATCACATTGGAAGTAGAGGCATCT 8186
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | || | ||| |||||| ||||| ||||| | || |||||
Sbjct 8187 GATACAATTGAGAATGTGAAGGCGAAAATTCAGGATAAGGAAGGGATCCCACCTGATCAG 8246
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|| ||||| || ||||| ||||||||| | |||||| | |||| | | |||||||||
Sbjct 8247 CAGAGACTGATTTTTGCTGGCAAACAACTCGAAGATGGGAGAACTCTATCTGATTACAAT 8306
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 25262
||||| ||||||||||| || ||| |||| || | || || || |||
Sbjct 8307 ATTCAGAAGGAATCTACCCTGCACCTGGTATTGAGGTTGCGTGGTGGG 8354
Score = 91.5 bits (100), Expect = 1e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
||||| ||||| | || ||||| || |||||||| ||||| || || ||||| |||
Sbjct 8505 GATAAGGAAGGGATCCCACCTGATCAGCAGAGACTTATATTTGCAGGAAAGCAATTAGAA 8564
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247
||| | ||| || | || || || |||||||||||||||||||||||| | ||| |
Sbjct 8565 GATGGCCGTACTTTGTCAGACTATAACATTCAAAAGGAATCTACTCTTCACCTTGTGCTC 8624
Query 25248 CGATTACGAGGAGGG 25262
|| | ||||||||
Sbjct 8625 AGACTTAGAGGAGGG 8639
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || || | || || | || ||||| ||||| || ||| |||| | ||
Sbjct 8640 ATGCAGATTTTTGTAAAGACCCTCACAGGCAAGACCATCACACTGGAAGTGGAAGCTTCA 8699
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | || | ||| ||| || || |||||||| | || ||| ||
Sbjct 8700 GACACAATTGAAAATGTGAAGGCAAAGATCCAGGACAAAGAAGGAATTCCACCAGACCAG 8759
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
||| | || || ||||| || || || |||||||| | ||| || | |||||||||
Sbjct 8760 CAACGTCTCATTTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACTCTGTCTGATTACAAT 8819
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||| |||||||| ||||| || ||||||| | || ||||||||
Sbjct 8820 ATTCAGAAGGAATCGACTCTCCATCTGGTGTTGAGGTTGCGAGGAGG 8866
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || || | || |||||||||||||| || || || || ||| | ||
Sbjct 9324 ATGCAGATCTTTGTGAAGACATTGACGGGCAAGACTATAACTTTGGATGTTGAAGCTTCA 9383
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | || | ||| ||||||| ||||| ||||| | || || |||
Sbjct 9384 GATACAATTGAGAATGTTAAGGCAAAAATTCAGGATAAGGAAGGAATACCACCTGACCAA 9443
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|| || || |||||||| ||||| ||| |||||||| || || | ||||||||
Sbjct 9444 CAGAGGCTAATCTTTGCAGGCAAGCAACTGGAAGATGGACGTACCCTGTCTGATTACAAC 9503
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||| || ||||| ||| | || ||||| | |||| ||||| ||
Sbjct 9504 ATTCAGAAAGAATCCACTTTGCATCTGGTGCTGAGATTGCGAGGTGG 9550
>seq708045
Length=25632
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|||||||| ||||| | || || |||||||| || || || ||| || ||| |
Sbjct 10388 AAAATGCAGATATTTGTGAAGACTTTGACGGGGAAGACTATCACCTTAGAGGTAGAAGCT 10447
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
| || || | | || | || ||||| ||||||||||| | ||| |||
Sbjct 10448 TCGGATACAATTGAAAATGTTAAAGCCAAAATCCAGGATAAAGAAGGAATTCCCCCGGAT 10507
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
|| || ||||| || ||||| ||||| || ||||||||| | ||| || | |||||
Sbjct 10508 CAGCAGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAACATTGTCTGATTAT 10567
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||| || || ||||||||| | ||| | |||||| || | || || ||
Sbjct 10568 AATATCCAGAAAGAATCTACTTTACACCTTGTGTTAAGACTCCGTGGTGG 10617
>seq302911
Length=9965
Score = 86.0 bits (94), Expect = 5e-12
Identities = 139/199 (70%), Gaps = 1/199 (1%)
Strand=Plus/Minus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
|||||||||||| | ||||| ||||| |||||||| || || ||| || || |
Sbjct 1014 AATGCAAATATTTGTGAAAACGTTGACTGGCAAAACAATAACATTAGAAGTTGAGCCGTC 955
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
||| || | | || |||| ||| ||| ||||||||||| | || ||| ||
Sbjct 954 AGACACAATAGAAAATGTCAAAGCAAAGATTCAGGATAAAGAAGGCATTCCACCAGACCA 895
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213
|| || || || ||||| || ||||| ||||||||| ||| || | ||||||||
Sbjct 894 GCAGAGGCTAATTTTTGCAGGGAAACAGTTGGAAGATGGACGGACTCTGTCAGATTACAA 835
Query 25214 TATTCA-AAAGGAATCTAC 25231
||| || ||||| || |||
Sbjct 834 TATACAGAAAGGTATGTAC 816
>seq1341392
Length=603
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| ||||| | || || | || ||||| ||||| || ||| ||| || ||
Sbjct 281 ATGCAGATATTTGTAAAGACCCTCACAGGCAAGACCATAACATTGGAAGTTGAAGCCTCA 340
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | || ||||| || ||| ||||| ||||| | || |||||||
Sbjct 341 GACACTATAGAAAATGTCAAGGCGAAGATTCAGGATAAGGAAGGCATTCCACCAGATCAA 400
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212
|| || || ||||| || || || ||| | |||||| || | ||| | | |||||||
Sbjct 401 CAGAGGCTGATCTTCGCAGGGAAGCAACTCGAAGATGGTCGTACACTGT--CTGATTACA 458
Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
| ||||| ||||||||||| || || |||| || |||| |||| ||
Sbjct 459 ACATTCAGAAGGAATCTACCCTCCATTTGGTACTAAGATTGAGAGGTGG 507
>seq238538
Length=16363
Score = 82.4 bits (90), Expect = 6e-11
Identities = 134/193 (69%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|| |||||||| ||| | || || | ||||| ||||||||||| || ||| ||
Sbjct 10713 AAGATGCAAATTTTCGTGAAGACCCTTACGGGGAAAACCATTACTTTAGAGGTAGAAGCC 10654
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
|||| || | | || | ||| || ||| ||||| |||||| | || |||
Sbjct 10653 TCAGACACAATTGAAAATGTGAAGGCGAAGATTCAAGATAAGGAAGGTATTCCACCAGAC 10594
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
|| || ||| | |||||||| ||||| || ||||||||| | ||| | | ||||||
Sbjct 10593 CAGCAGAGATTGATCTTTGCTGGCAAGCAGTTGGAAGATGGAAGGACTCTTTCTGATTAC 10534
Query 25212 AATATTCAAAAGG 25224
|| ||||||||||
Sbjct 10533 AACATTCAAAAGG 10521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 403800136117688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |