Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq600855 136 3e-27 >seq600855 Length=4662 Score = 136 bits (150), Expect = 3e-27 Identities = 225/325 (69%), Gaps = 0/325 (0%) Strand=Plus/Minus Query 97131 CATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGC 97190 ||| || || ||||||| |||||| || | ||||| || || || ||||||||||| || Sbjct 2574 CATGCATGTCAATAGAGCATAGCTGGCTACATTAAATGGAACACCAAGTCCCATATCTGC 2515 Query 97191 TGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGACTCAATAC 97250 ||||||||| |||| ||| || || |||| |||| |||||||| || ||| Sbjct 2514 TGATCTTTGGTATAGCTGGCATGACAGCTCCCCATTTGCTACATAAAATTGTACCAAGCA 2455 Query 97251 ATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACAT 97310 ||| || ||||||| ||||| | |||| ||||| |||||||| | || Sbjct 2454 ATGGCAAGGGGGCAGAGCCATAAGGCCCAAATCTCGTGGGTTCCACGCACACATGATGAT 2395 Query 97311 TCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCC 97370 | | ||| ||| |||||| ||| || | || | |||| | ||||||||| || Sbjct 2394 GCGGCGATCATCTGGATTTGTGCGTAGTGTGTGTATCACATGCTGAAGTTGATCAACACC 2335 Query 97371 TTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAA 97430 || || |||| ||| | | |||| || ||||||||||| || | ||| || || Sbjct 2334 TTTGCCCTCATAGTTGGAATCAGTTCCTTCGTAATCTGCTCCAAAGTGGCGCCACTGAAA 2275 Query 97431 TCCATAAACAGGTCCAAGGTCTCCT 97455 ||||| || || |||||||| ||| Sbjct 2274 ACCATACACTGGACCAAGGTCACCT 2250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340877597886440