Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq741633 129 5e-25
seq302910 120 3e-22
seq1341392 98.7 8e-16
seq302911 93.3 4e-14
>seq741633
Length=11487
Score = 129 bits (142), Expect = 5e-25
Identities = 156/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | |||||||||||| |||||||||||||| || |||||| ||| ||
Sbjct 9076 ACCAGGTGAAGTGTAGACTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCA 9017
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||||||||| || | || | | ||| || || || ||||| || ||||||||
Sbjct 9016 AGCTGTTTTCCTGCAAAAATCAATCTCTGTTGGTCTGGTGGTATACCTTCCTTGTCCTGG 8957
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| ||| || || | || | |||||| | ||| ||| || |||| || | |||||
Sbjct 8956 ATCTTTGCCTTCACGTTCTCTATGGTGTCTGATGC-CTCCACTTCGAGTGTTATAGTTTT 8898
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| |||||||| |||||||| ||||||||
Sbjct 8897 GCCAGTCAGAGTCTTTACAAAGATCTGCAT 8868
Score = 129 bits (142), Expect = 5e-25
Identities = 162/220 (74%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 118524 CTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA 118583
|||| |||||| || | |||||| ||||| || || ||||| || | |||||| |
Sbjct 9310 CTCAGCACCAAATGTAGTGTAGATTCTTTCTGGATATTGTAGTCTGAAAGAGTGCGGCCA 9251
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
||||| || ||||| ||||| | || | | |||||| || || || ||||| |||||
Sbjct 9250 TCCTCAAGTTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGTGGGATGCCTTCCTTA 9191
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCAC 118702
||| ||||||| ||| || | || | ||||| | |||| || ||||| | || |
Sbjct 9190 TCTTGAATTTTTGCTTTTACATTCTCAATAGTGTCAGATGCT-TCAACCTCTAATGTTAT 9132
Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
||||| || || |||||||||||||||||||||||| ||
Sbjct 9131 GGTTTTCCCTGTAAGAGTTTTTACAAAAATCTGCATGCCT 9092
Score = 120 bits (132), Expect = 3e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | |||| ||||| || | ||||| || || ||||||||||||||
Sbjct 9780 TACCACCACGCAGCCTCAGCACCAGATGCAAAGTAGATTCCTTCTGAATGTTGTAATCCG 9721
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || || ||| || || || || ||||| |||||||||||||||| || ||||
Sbjct 9720 ACAGGGTTCGTCCATCTTCCAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCTGGAG 9661
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGT-GCTCTCG 118688
| ||||| |||||||| || ||| || || | ||| | ||||| | ||| ||
Sbjct 9660 GAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTTTCAATAGTGTCTGAAGCT-TCT 9602
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| | ||| | || ||||| || || || || ||||||||||||||
Sbjct 9601 ACCTCCAGGGTAATTGTCTTGCCAGTAAGGGTCTTCACAAAAATCTGCAT 9552
Score = 120 bits (132), Expect = 3e-22
Identities = 160/218 (73%), Gaps = 6/218 (3%)
Strand=Plus/Minus
Query 118524 CTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT- 118582
|||| ||||| || | ||||| || ||||| ||||||||||| | ||| | | |
Sbjct 10450 CTCAGAACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAATC--TGATAAGGTCCTTC 10393
Query 118583 -ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCT 118641
||| || | ||||||||| || ||||||| ||||| ||||| ||||| ||||| ||||
Sbjct 10392 CATCTTCCAACTGTTTTCCTGCAAAGATGAGTCGCTGTTGATCTGGAGGAATGCCTTCCT 10333
Query 118642 TGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGT-GCTCTCGACCTCGACGGTC 118700
||||| || ||| ||| || | || | |||||| | ||| || ||||| | ||
Sbjct 10332 TGTCTTGGATCTTTGCTTTGACATTCTCAATGGTGTCAGAAGCT-TCCACCTCCAGAGTA 10274
Query 118701 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || ||||| || ||||| || ||||||||||||||
Sbjct 10273 ATTGTCTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 10236
Score = 114 bits (126), Expect = 1e-20
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||||||| || || |||||||||| |||| || || || || ||||| ||||||||
Sbjct 8868 TACCTCCTCGCAACCTCAACACCAGATGGAGAGTCGATTCCTTCTGAATATTGTAATCAG 8809
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| |||||| ||| || ||||| || ||||| | |||||||| ||||| || || |
Sbjct 8808 ACAGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATGAGACGTTGCTGGTCTGGTG 8749
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGT-GCTCTCG 118688
| || || || ||||| || ||| || || | ||| | ||||| | ||| ||
Sbjct 8748 GAATTCCTTCTTTGTCCTGGATCTTTGCCTTCACATTTTCAATTGTGTCTGAAGCT-TCC 8690
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || | || | || ||||| || || || |||||||||||||||||
Sbjct 8689 ACTTCCAGTGTGATGGTCTTGCCTGTGAGGGTCTTTACAAAAATCTGCAT 8640
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| ||||| || || | ||||| || | ||||| || || |||||||||||||| |
Sbjct 11146 CCACCGCGCAACCTTAGCACCAGATGCAGAGTAGATTCCTTCTGAATGTTGTAATCTGAC 11087
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||||| ||| || ||||| || ||||| |||||||||| |||||||| |||||
Sbjct 11086 AGGGTGCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCTGGAGGA 11027
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| || || ||||| || || || || | || | |||||||| ||| ||
Sbjct 11026 ATCCCTTCTTTGTCCTGGATCTTCGCCTTCACATTCTCAATGGTGTCCGACGCCTCCACT 10967
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | ||||| || || || || || || || ||||||||
Sbjct 10966 TCCAAGGTAATGGTTTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 10920
Score = 105 bits (116), Expect = 6e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||||||| || | |||| ||| || || | || || || || ||||||||||||||
Sbjct 10692 TACCTCCACGCAGCCTCAGCACTAAATGCAAAGTGGATTCCTTCTGAATGTTGTAATCAG 10633
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| || | ||| || ||||| || ||||| ||||||||||||| || || ||||
Sbjct 10632 ATAAGGTCCTTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGAG 10573
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688
| ||||| || || ||| ||| || ||| || | ||| | ||||| | ||| |||
Sbjct 10572 GGATGCCTTCTTTATCTTGAATCTTAGCTTTCACATTTTCAATTGTGTCAGATGC-CTCA 10514
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || | || | |||||||| || || || || |||||||| |||||
Sbjct 10513 ACTTCCAATGTAATTGTTTTGCCAGTAAGTGTCTTCACAAAAATTTGCAT 10464
Score = 102 bits (112), Expect = 7e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | ||||| | ||||| |||| ||||| || || ||||||||||||||
Sbjct 8127 TACCACCTCTCAATCTTAGTACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAG 8068
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || || ||| ||||| || || || ||| |||| || | ||| || || || |
Sbjct 8067 ACAGTGTACGACCATCTTCGAGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGGTCTGGTG 8008
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688
| || || ||||| || ||| || ||| || | ||| | |||||| | ||| |||
Sbjct 8007 GAATACCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCTGATGC-CTCT 7949
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || | ||| | || ||||| ||||| || || || || ||||||||
Sbjct 7948 ACTTCAAGGGTGATTGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 7899
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | |||| ||||| || | || || || || ||||||||||||||
Sbjct 10920 TACCACCACGCAGCCTCAGCACCAGATGCAAAGTGGATTCCTTCTGAATGTTGTAATCTG 10861
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || || ||| || ||||| || |||||| |||||||||| ||||| || || |
Sbjct 10860 ACAGGGTTCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCTGGTG 10801
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || || |||||| || ||| || || | || | |||||| | ||| |
Sbjct 10800 GAATACCTTCTTTGTCTTGTATCTTTGCCTTCACATTCTCAATGGTGTCTGAAGCCTCCA 10741
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | || | || ||||| || || || || ||||||||||||||
Sbjct 10740 CTTCCAATGTAATTGTCTTGCCTGTAAGTGTCTTCACAAAAATCTGCAT 10692
Score = 91.5 bits (100), Expect = 1e-13
Identities = 162/234 (69%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || ||||||| ||||| || | || || ||||| ||||||||||||||
Sbjct 9552 TACCACCTCGCAATCTCAGCACCAGATGCAAAGTGGATTCTTTCTGAATGTTGTAATCAG 9493
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || || ||| || || || || || || |||| || | ||| || || || |
Sbjct 9492 ACAGGGTACGTCCATCTTCCAGTTGCTTGCCTGCAAAGATTAGCCTCTGTTGGTCAGGTG 9433
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688
|||| || ||||| || ||||||| ||||| | || | || || | ||| ||
Sbjct 9432 GTATTCCTTCCTTATCCTGAATTTTTGCCTTAACATTCTCAATTGTATCTGAAGCT-TCA 9374
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| || | || | || ||||| |||| || || ||||| ||||||||| ||
Sbjct 9373 ACATCCAAAGTTATAGTCTTGCCCGTCAATGTCTTCACAAAGATCTGCATGCCT 9320
Score = 89.7 bits (98), Expect = 4e-13
Identities = 151/214 (71%), Gaps = 6/214 (3%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCC 118586
|||||| || | || || ||||| ||||| || || || | |||| ||| |||
Sbjct 11357 CACCAAATGAAGAGTGGATTCTTTCTGAATATTATAGTCCG--AAAGTGTACGTCCATCT 11300
Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646
|| | |||||| || || ||||||| ||||| ||||| || || ||||| ||||| |||
Sbjct 11299 TCCAACTGTTTGCCTGCAAAGATGAGTCGCTGTTGATCTGGGGGAATGCCTTCCTTATCT 11240
Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGT-GCTCTCGACCTCGACGGTCACCGT 118705
||||| || || | || | ||||| | ||| || ||||| | || | ||
Sbjct 11239 TGGATTTTCGCCTTCACATTCTCAATTGTGTCGGAAGCT-TCCACCTCCAGAGTAATGGT 11181
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| ||||| ||||| || |||||||||||||||
Sbjct 11180 CTTCCCGGTAAGAGTCTTCACAAAAATCTGCATG 11147
>seq302910
Length=12142
Score = 120 bits (132), Expect = 3e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGA 118608
||||||| ||||||||||| | ||| | |||||| || ||||| ||||| |||
Sbjct 11150 CTTTTTGTATGTTGTAATCTGAGAGAGTTCTTCCATCCTCAAGTTGTTTACCAGCAAAGA 11209
Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTT 118668
| | ||||| ||||| || ||||| || || |||||| ||||||| ||| || | ||
Sbjct 11210 TTAATCGCTGTTGATCTGGCGGTATTCCTTCTTTGTCTTGAATTTTTGCTTTTACATTTT 11269
Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728
| | ||||| | ||| || || | || | ||||| || ||||||||||||||||
Sbjct 11270 CAATTGTGTCTGATGGCTCAACTTCCAATGTTATTGTTTTCCCTGTCAGAGTTTTTACAA 11329
Query 118729 AAATCTGCATG 118739
|||||||||||
Sbjct 11330 AAATCTGCATG 11340
>seq1341392
Length=603
Score = 98.7 bits (108), Expect = 8e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | ||||| | ||||| |||| ||||| || || ||||||||||||||
Sbjct 509 TACCACCTCTCAATCTTAGTACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAG 450
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || || ||| ||||| || || || ||| |||| || | ||| ||||| || |
Sbjct 449 ACAGTGTACGACCATCTTCGAGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGATCTGGTG 390
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| ||||| ||||| || ||| || || || | ||| | ||||| | | || |
Sbjct 389 GAATGCCTTCCTTATCCTGAATCTTCGCCTTGACATTTTCTATAGTGTCTGAGGCTTCAA 330
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | || | || ||||| || || || |||||||| ||||||||
Sbjct 329 CTTCCAATGTTATGGTCTTGCCTGTGAGGGTCTTTACAAATATCTGCAT 281
>seq302911
Length=9965
Score = 93.3 bits (102), Expect = 4e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGA 118608
||||||| ||||||||||| || |||||| ||| || |||||||| ||||| | |
Sbjct 1226 CTTTTTGTATGTTGTAATCTGACAAAGTGCGACCATCTTCCAGCTGTTTGCCAGCAAATA 1285
Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTT 118668
| |||||||||||||| || || || || || |||||| ||| ||| |||||| | ||
Sbjct 1286 TCAGACGCTGCTGATCAGGTGGAATACCTTCTTTGTCTTGAATCTTTGCTTTAACATTTT 1345
Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728
| | || || | || || || | || | || || || || | || || || |
Sbjct 1346 CAATTGTATCTGAAGGTTCAACTTCCAATGTTATTGTCTTCCCCGTTAATGTCTTCACGA 1405
Query 118729 AAATCTGCATGGCT 118742
| ||||||||| ||
Sbjct 1406 AGATCTGCATGTCT 1419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426441429368464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |