Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq741633 129 5e-25 seq302910 120 3e-22 seq1341392 98.7 8e-16 seq302911 93.3 4e-14 >seq741633 Length=11487 Score = 129 bits (142), Expect = 5e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | |||||||||||| |||||||||||||| || |||||| ||| || Sbjct 9076 ACCAGGTGAAGTGTAGACTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCA 9017 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||||||||| || | || | | ||| || || || ||||| || |||||||| Sbjct 9016 AGCTGTTTTCCTGCAAAAATCAATCTCTGTTGGTCTGGTGGTATACCTTCCTTGTCCTGG 8957 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708 || ||| || || | || | |||||| | ||| ||| || |||| || | ||||| Sbjct 8956 ATCTTTGCCTTCACGTTCTCTATGGTGTCTGATGC-CTCCACTTCGAGTGTTATAGTTTT 8898 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| |||||||| |||||||| |||||||| Sbjct 8897 GCCAGTCAGAGTCTTTACAAAGATCTGCAT 8868 Score = 129 bits (142), Expect = 5e-25 Identities = 162/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 118524 CTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA 118583 |||| |||||| || | |||||| ||||| || || ||||| || | |||||| | Sbjct 9310 CTCAGCACCAAATGTAGTGTAGATTCTTTCTGGATATTGTAGTCTGAAAGAGTGCGGCCA 9251 Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||| || ||||| ||||| | || | | |||||| || || || ||||| ||||| Sbjct 9250 TCCTCAAGTTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGTGGGATGCCTTCCTTA 9191 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCAC 118702 ||| ||||||| ||| || | || | ||||| | |||| || ||||| | || | Sbjct 9190 TCTTGAATTTTTGCTTTTACATTCTCAATAGTGTCAGATGCT-TCAACCTCTAATGTTAT 9132 Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||||| || || |||||||||||||||||||||||| || Sbjct 9131 GGTTTTCCCTGTAAGAGTTTTTACAAAAATCTGCATGCCT 9092 Score = 120 bits (132), Expect = 3e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | |||| ||||| || | ||||| || || |||||||||||||| Sbjct 9780 TACCACCACGCAGCCTCAGCACCAGATGCAAAGTAGATTCCTTCTGAATGTTGTAATCCG 9721 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || || ||| || || || || ||||| |||||||||||||||| || |||| Sbjct 9720 ACAGGGTTCGTCCATCTTCCAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCTGGAG 9661 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGT-GCTCTCG 118688 | ||||| |||||||| || ||| || || | ||| | ||||| | ||| || Sbjct 9660 GAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTTTCAATAGTGTCTGAAGCT-TCT 9602 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| | ||| | || ||||| || || || || |||||||||||||| Sbjct 9601 ACCTCCAGGGTAATTGTCTTGCCAGTAAGGGTCTTCACAAAAATCTGCAT 9552 Score = 120 bits (132), Expect = 3e-22 Identities = 160/218 (73%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 118524 CTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT- 118582 |||| ||||| || | ||||| || ||||| ||||||||||| | ||| | | | Sbjct 10450 CTCAGAACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAATC--TGATAAGGTCCTTC 10393 Query 118583 -ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCT 118641 ||| || | ||||||||| || ||||||| ||||| ||||| ||||| ||||| |||| Sbjct 10392 CATCTTCCAACTGTTTTCCTGCAAAGATGAGTCGCTGTTGATCTGGAGGAATGCCTTCCT 10333 Query 118642 TGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGT-GCTCTCGACCTCGACGGTC 118700 ||||| || ||| ||| || | || | |||||| | ||| || ||||| | || Sbjct 10332 TGTCTTGGATCTTTGCTTTGACATTCTCAATGGTGTCAGAAGCT-TCCACCTCCAGAGTA 10274 Query 118701 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || ||||| || ||||| || |||||||||||||| Sbjct 10273 ATTGTCTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 10236 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| || || |||||||||| |||| || || || || ||||| |||||||| Sbjct 8868 TACCTCCTCGCAACCTCAACACCAGATGGAGAGTCGATTCCTTCTGAATATTGTAATCAG 8809 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || |||||| ||| || ||||| || ||||| | |||||||| ||||| || || | Sbjct 8808 ACAGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATGAGACGTTGCTGGTCTGGTG 8749 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGT-GCTCTCG 118688 | || || || ||||| || ||| || || | ||| | ||||| | ||| || Sbjct 8748 GAATTCCTTCTTTGTCCTGGATCTTTGCCTTCACATTTTCAATTGTGTCTGAAGCT-TCC 8690 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || | || | || ||||| || || || ||||||||||||||||| Sbjct 8689 ACTTCCAGTGTGATGGTCTTGCCTGTGAGGGTCTTTACAAAAATCTGCAT 8640 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| || || | ||||| || | ||||| || || |||||||||||||| | Sbjct 11146 CCACCGCGCAACCTTAGCACCAGATGCAGAGTAGATTCCTTCTGAATGTTGTAATCTGAC 11087 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| ||| || ||||| || ||||| |||||||||| |||||||| ||||| Sbjct 11086 AGGGTGCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCTGGAGGA 11027 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || || || ||||| || || || || | || | |||||||| ||| || Sbjct 11026 ATCCCTTCTTTGTCCTGGATCTTCGCCTTCACATTCTCAATGGTGTCCGACGCCTCCACT 10967 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | ||| | ||||| || || || || || || || |||||||| Sbjct 10966 TCCAAGGTAATGGTTTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 10920 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| || | |||| ||| || || | || || || || |||||||||||||| Sbjct 10692 TACCTCCACGCAGCCTCAGCACTAAATGCAAAGTGGATTCCTTCTGAATGTTGTAATCAG 10633 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | || | ||| || ||||| || ||||| ||||||||||||| || || |||| Sbjct 10632 ATAAGGTCCTTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGAG 10573 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688 | ||||| || || ||| ||| || ||| || | ||| | ||||| | ||| ||| Sbjct 10572 GGATGCCTTCTTTATCTTGAATCTTAGCTTTCACATTTTCAATTGTGTCAGATGC-CTCA 10514 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || | || | |||||||| || || || || |||||||| ||||| Sbjct 10513 ACTTCCAATGTAATTGTTTTGCCAGTAAGTGTCTTCACAAAAATTTGCAT 10464 Score = 102 bits (112), Expect = 7e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | ||||| | ||||| |||| ||||| || || |||||||||||||| Sbjct 8127 TACCACCTCTCAATCTTAGTACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAG 8068 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || || ||| ||||| || || || ||| |||| || | ||| || || || | Sbjct 8067 ACAGTGTACGACCATCTTCGAGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGGTCTGGTG 8008 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688 | || || ||||| || ||| || ||| || | ||| | |||||| | ||| ||| Sbjct 8007 GAATACCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCTGATGC-CTCT 7949 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || | ||| | || ||||| ||||| || || || || |||||||| Sbjct 7948 ACTTCAAGGGTGATTGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 7899 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | |||| ||||| || | || || || || |||||||||||||| Sbjct 10920 TACCACCACGCAGCCTCAGCACCAGATGCAAAGTGGATTCCTTCTGAATGTTGTAATCTG 10861 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || || ||| || ||||| || |||||| |||||||||| ||||| || || | Sbjct 10860 ACAGGGTTCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCTGGTG 10801 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || |||||| || ||| || || | || | |||||| | ||| | Sbjct 10800 GAATACCTTCTTTGTCTTGTATCTTTGCCTTCACATTCTCAATGGTGTCTGAAGCCTCCA 10741 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | || ||||| || || || || |||||||||||||| Sbjct 10740 CTTCCAATGTAATTGTCTTGCCTGTAAGTGTCTTCACAAAAATCTGCAT 10692 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || ||||||| ||||| || | || || ||||| |||||||||||||| Sbjct 9552 TACCACCTCGCAATCTCAGCACCAGATGCAAAGTGGATTCTTTCTGAATGTTGTAATCAG 9493 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || || ||| || || || || || || |||| || | ||| || || || | Sbjct 9492 ACAGGGTACGTCCATCTTCCAGTTGCTTGCCTGCAAAGATTAGCCTCTGTTGGTCAGGTG 9433 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688 |||| || ||||| || ||||||| ||||| | || | || || | ||| || Sbjct 9432 GTATTCCTTCCTTATCCTGAATTTTTGCCTTAACATTCTCAATTGTATCTGAAGCT-TCA 9374 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || || | || | || ||||| |||| || || ||||| ||||||||| || Sbjct 9373 ACATCCAAAGTTATAGTCTTGCCCGTCAATGTCTTCACAAAGATCTGCATGCCT 9320 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/214 (71%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCC 118586 |||||| || | || || ||||| ||||| || || || | |||| ||| ||| Sbjct 11357 CACCAAATGAAGAGTGGATTCTTTCTGAATATTATAGTCCG--AAAGTGTACGTCCATCT 11300 Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 || | |||||| || || ||||||| ||||| ||||| || || ||||| ||||| ||| Sbjct 11299 TCCAACTGTTTGCCTGCAAAGATGAGTCGCTGTTGATCTGGGGGAATGCCTTCCTTATCT 11240 Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGT-GCTCTCGACCTCGACGGTCACCGT 118705 ||||| || || | || | ||||| | ||| || ||||| | || | || Sbjct 11239 TGGATTTTCGCCTTCACATTCTCAATTGTGTCGGAAGCT-TCCACCTCCAGAGTAATGGT 11181 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || ||||| ||||| || ||||||||||||||| Sbjct 11180 CTTCCCGGTAAGAGTCTTCACAAAAATCTGCATG 11147 >seq302910 Length=12142 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGA 118608 ||||||| ||||||||||| | ||| | |||||| || ||||| ||||| ||| Sbjct 11150 CTTTTTGTATGTTGTAATCTGAGAGAGTTCTTCCATCCTCAAGTTGTTTACCAGCAAAGA 11209 Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTT 118668 | | ||||| ||||| || ||||| || || |||||| ||||||| ||| || | || Sbjct 11210 TTAATCGCTGTTGATCTGGCGGTATTCCTTCTTTGTCTTGAATTTTTGCTTTTACATTTT 11269 Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 | | ||||| | ||| || || | || | ||||| || |||||||||||||||| Sbjct 11270 CAATTGTGTCTGATGGCTCAACTTCCAATGTTATTGTTTTCCCTGTCAGAGTTTTTACAA 11329 Query 118729 AAATCTGCATG 118739 ||||||||||| Sbjct 11330 AAATCTGCATG 11340 >seq1341392 Length=603 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | ||||| | ||||| |||| ||||| || || |||||||||||||| Sbjct 509 TACCACCTCTCAATCTTAGTACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAG 450 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || || ||| ||||| || || || ||| |||| || | ||| ||||| || | Sbjct 449 ACAGTGTACGACCATCTTCGAGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGATCTGGTG 390 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||| ||||| || ||| || || || | ||| | ||||| | | || | Sbjct 389 GAATGCCTTCCTTATCCTGAATCTTCGCCTTGACATTTTCTATAGTGTCTGAGGCTTCAA 330 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | || ||||| || || || |||||||| |||||||| Sbjct 329 CTTCCAATGTTATGGTCTTGCCTGTGAGGGTCTTTACAAATATCTGCAT 281 >seq302911 Length=9965 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGA 118608 ||||||| ||||||||||| || |||||| ||| || |||||||| ||||| | | Sbjct 1226 CTTTTTGTATGTTGTAATCTGACAAAGTGCGACCATCTTCCAGCTGTTTGCCAGCAAATA 1285 Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTT 118668 | |||||||||||||| || || || || || |||||| ||| ||| |||||| | || Sbjct 1286 TCAGACGCTGCTGATCAGGTGGAATACCTTCTTTGTCTTGAATCTTTGCTTTAACATTTT 1345 Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 | | || || | || || || | || | || || || || | || || || | Sbjct 1346 CAATTGTATCTGAAGGTTCAACTTCCAATGTTATTGTCTTCCCCGTTAATGTCTTCACGA 1405 Query 118729 AAATCTGCATGGCT 118742 | ||||||||| || Sbjct 1406 AGATCTGCATGTCT 1419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426441429368464