Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq102397 100 5e-16 >seq102397 Length=12411 Score = 100 bits (110), Expect = 5e-16 Identities = 143/200 (72%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 189436 AACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCA 189495 ||| ||||| | ||||||| | | ||||| ||| | |||| ||| |||||||| || Sbjct 7998 AACACATGACGATTTATGGAATTCTGCCCAAATTCAGTTAGTGAAAGATGGAAAAATACA 7939 Query 189496 TAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGA 189555 | | || | || ||||||||||| ||||||||| | ||||||||| | |||| ||||| Sbjct 7938 TGGCTTCATGCGTATGTATTGGGCAAAGAAGATATTAGAATGGACTCCATCACCAGAAGA 7879 Query 189556 CGCTTTGAGTTATAGTATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAA 189615 ||||| || | || ||||| || | | ||| | | || || | |||||||| Sbjct 7878 AGCTTTAAGAACTGCAATTTATTTTAATGATAGATACTCATTGGATGGAGCAGATCCTAA 7819 Query 189616 CGGATACGTAGG-TTGTATG 189634 |||| || || ||||||| Sbjct 7818 TGGATTTGTTGGTTTGTATG 7799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 907069798219680