Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq741633 122 6e-23
seq708045 91.5 9e-14
seq302911 86.0 4e-12
seq831174 82.4 5e-11
>seq741633
Length=11487
Score = 122 bits (134), Expect = 6e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||||||||||||||| || |||||| ||| ||||| |||||||| || |||
Sbjct 9778 CCACCACGCAGCCTCAGCACCAGATGCAAAGTAGATTCCTTCTGAATGTTGTAATCCGAC 9719
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || | || |||| ||||| || || || ||||| ||||||||||| ||
Sbjct 9718 AGGGTTCGTCCATCTTCCAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCTGGAGGA 9659
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || |||||||| |||||| ||| | || | || | || | | ||| ||
Sbjct 9658 ATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTTTCAATAGTGTCTGAAGCTTCTACC 9599
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || || || ||||| || || || |||||||| ||||||||
Sbjct 9598 TCCAGGGTAATTGTCTTGCCAGTAAGGGTCTTCACAAAAATCTGCAT 9552
Score = 116 bits (128), Expect = 2e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||||||||||||||| || ||||| ||| ||||| |||||||| || |||
Sbjct 10918 CCACCACGCAGCCTCAGCACCAGATGCAAAGTGGATTCCTTCTGAATGTTGTAATCTGAC 10859
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || | || |||| ||||||||| ||||| ||||| || |||||||| ||
Sbjct 10858 AGGGTTCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGA 10799
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | || ||||| ||||||| ||| | || | || | || | | || ||
Sbjct 10798 ATACCTTCTTTGTCTTGTATCTTTGCCTTCACATTCTCAATGGTGTCTGAAGCCTCCACT 10739
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || || || ||||| || || || |||||||| ||||||||
Sbjct 10738 TCCAATGTAATTGTCTTGCCTGTAAGTGTCTTCACAAAAATCTGCAT 10692
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || |||| ||||||||||| || ||||| ||||||||| |||||||| || |||
Sbjct 9550 CCACCTCGCAATCTCAGCACCAGATGCAAAGTGGATTCTTTCTGAATGTTGTAATCAGAC 9491
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || |||| ||||||||||| || || |||| ||| ||||| ||
Sbjct 9490 AGGGTACGTCCATCTTCCAGTTGCTTGCCTGCAAAGATTAGCCTCTGTTGGTCAGGTGGT 9431
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||| || || ||| ||| | || | || | ||| | | ||| ||
Sbjct 9430 ATTCCTTCCTTATCCTGAATTTTTGCCTTAACATTCTCAATTGTATCTGAAGCTTCAACA 9371
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || || || ||||| || | || |||||||||||||||||
Sbjct 9370 TCCAAAGTTATAGTCTTGCCCGTCAATGTCTTCACAAAGATCTGCAT 9324
Score = 98.7 bits (108), Expect = 6e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||||| ||| |||||||| || | |||| ||| ||||| |||||||| || |||
Sbjct 11146 CCACCGCGCAACCTTAGCACCAGATGCAGAGTAGATTCCTTCTGAATGTTGTAATCTGAC 11087
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || | || || | ||||||||| || || ||||| || ||||| || ||
Sbjct 11086 AGGGTGCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCTGGAGGA 11027
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | || ||||| ||||| ||| | || | || | || | || || ||
Sbjct 11026 ATCCCTTCTTTGTCCTGGATCTTCGCCTTCACATTCTCAATGGTGTCCGACGCCTCCACT 10967
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || |||||||| || || || || ||||| |||||||||||
Sbjct 10966 TCCAAGGTAATGGTTTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 10920
Score = 95.1 bits (104), Expect = 8e-15
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231
||||||||||||| |||| ||| ||||||||| || |||||||| || || |||
Sbjct 9313 AGCCTCAGCACCAAATGTAGTGTAGATTCTTTCTGGATATTGTAGTCTGAAAGAGTGCGG 9254
Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291
| || || | || ||||| || ||||| | | ||||||||| || | || |||
Sbjct 9253 CCATCCTCAAGTTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGTGGGATGCCTTCC 9194
Query 34292 TTGTCGGCTATCTTTTGC-TTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGT 34350
|| || || |||||| |||| || | || | || | | ||| || || | ||
Sbjct 9193 TTATCTTGAAT-TTTTGCTTTTACATTCTCAATAGTGTCAGATGCTTCAACCTCTAATGT 9135
Query 34351 GATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||| || || |||||||| ||||| ||||||||
Sbjct 9134 TATGGTTTTCCCTGTAAGAGTTTTTACAAAAATCTGCAT 9096
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || | |||||| || |||||||| | ||| |||||||| |||||||| || |||
Sbjct 9094 CCTCCCCTCAGCCTAAGAACCAGGTGAAGTGTAGACTCTTTCTGAATGTTGTAATCTGAC 9035
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| ||| | || || | ||| || ||||| ||||| | | ||| ||||| ||
Sbjct 9034 AAAGTGCGGCCATCTTCAAGCTGTTTTCCTGCAAAAATCAATCTCTGTTGGTCTGGTGGT 8975
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | |||||||| |||||| ||| | | |||| | || | | || ||
Sbjct 8974 ATACCTTCCTTGTCCTGGATCTTTGCCTTCACGTTCTCTATGGTGTCTGATGCCTCCACT 8915
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | || || |||||||| || ||||| || ||||||||||||||
Sbjct 8914 TCGAGTGTTATAGTTTTGCCAGTCAGAGTCTTTACAAAGATCTGCAT 8868
>seq708045
Length=25632
Score = 91.5 bits (100), Expect = 9e-14
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || || || || | ||| |||||||||||| ||||||||| || || || || ||
Sbjct 10618 TCCACCACGGAGTCTTAACACAAGGTGTAAAGTAGATTCTTTCTGGATATTATAATCAGA 10559
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| ||| | || |||||||||||||| || || || || | |||||| || |||
Sbjct 10558 CAATGTTCGGCCATCTTCCAACTGCTTGCCAGCAAATATCAGTCTCTGCTGATCCGGGGG 10499
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340
| | || || || || ||| ||||| | || | || | ||| | | ||| |
Sbjct 10498 AATTCCTTCTTTATCCTGGAT-TTTGGCTTTAACATTTTCAATTGTATCCGAAGCTTCTA 10440
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| || | ||||| || || || || | ||| |||||||| ||||||||
Sbjct 10439 CCTCTAAGGTGATAGTCTTCCCCGTCAAAGTCTTCACAAATATCTGCAT 10391
>seq302911
Length=9965
Score = 86.0 bits (94), Expect = 4e-12
Identities = 135/191 (71%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 34200 CTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAA 34259
|||||||||| ||||| || ||||| || | || |||||||| || ||||| ||||
Sbjct 824 CTTTCTGTATATTGTAATCTGACAGAGTCCGTCCATCTTCCAACTGTTTCCCTGCAAAAA 883
Query 34260 TGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCG 34318
| |||| ||||||||| || | || || || || |||||| ||||| | ||
Sbjct 884 TTAGCCTCTGCTGGTCTGGTGGAATGCCTTCTTTATCCTGAATCTTT-GCTTTGACATTT 942
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
|||| | || | || || || || | || || |||||||| || | |||||||||
Sbjct 943 TCTATTGTGTCTGACGGCTCAACTTCTAATGTTATTGTTTTGCCAGTCAACGTTTTCACA 1002
Query 34379 AAGATCTGCAT 34389
|| || |||||
Sbjct 1003 AATATTTGCAT 1013
>seq831174
Length=18794
Score = 82.4 bits (90), Expect = 5e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || || || |||| ||| |||||||||||| || |||||| || || || || ||
Sbjct 4338 TCCACCACGGAGTCTCAACACAAGGTGTAAAGTAGATTATTTCTGGATATTATAATCAGA 4279
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| ||| | || |||||||||||||| || || || || | |||||| || |||
Sbjct 4278 CAATGTTCGGCCATCTTCCAACTGCTTGCCAGCAAATATCAGTCTCTGCTGATCCGTGGG 4219
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGC-TTTAGATCGGCTATCGAATCGGTCGATTCGA 34340
| | || || || || ||| || || | || | || | ||| | | ||| |
Sbjct 4218 AATTCCTTCTTTATCCTGGAT-TTTGGCATTAACATTTTCAATTGTATCCGAAGCTTCTA 4160
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| || | ||||| || || || || | | | |||||||| ||||||||
Sbjct 4159 CCTCTAAGGTGATAGTCTTCCCCGTCAAATTCTTCACAAATATCTGCAT 4111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 317569459099520
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