Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq791531 111 1e-19
seq780057 89.7 5e-13
>seq791531
Length=8839
Score = 111 bits (122), Expect = 1e-19
Identities = 124/163 (76%), Gaps = 2/163 (1%)
Strand=Plus/Minus
Query 16504 AATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTG 16563
||| || ||||| || || | ||||||||| || ||||| | ||||||||| || || ||
Sbjct 7001 AATGTATGTATCAATGAGAAGACTATACATCTCAGAATGCACATTCTCCATAGCAATTTG 6942
Query 16564 AAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCA-GAGTAAAACCTTTCTGCTA 16622
|| ||||| || ||||| ||||| | || ||| ||||| || | || |||||| | |
Sbjct 6941 GAAGCCATAGAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTGAA-CCTTTCAACCA 6883
Query 16623 AGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAG 16665
|||||||||||| || ||||| ||||| || || || || ||
Sbjct 6882 GGTTTTCGTTAACAATGCCATCACTAGCAGCGAAGAAAGCTAG 6840
Score = 91.5 bits (100), Expect = 1e-13
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 16285 AAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACC 16344
|||||||||||||||||||| |||| || |||| ||| || ||||| ||||| ||
Sbjct 7311 AAATGTAAGACCTGGCATTAAACCTCTCTTCTTAAGCCAGAAAATAGCTGCAAAACTGCC 7252
Query 16345 AGAAAAGAATATACCTTCAACTGCGGCAAATGCAA 16379
||| |||||||| ||||| || || ||||||||||
Sbjct 7251 AGAGAAGAATATGCCTTCCACAGCAGCAAATGCAA 7217
Score = 87.8 bits (96), Expect = 2e-12
Identities = 104/138 (75%), Gaps = 5/138 (4%)
Strand=Plus/Minus
Query 16046 CATCCCAATTCCAACAATAA-TCTATCCGCCACAAATTCTATATACTGTTTCATTAAATC 16104
|| ||||| |||| ||| || |||||| || |||||||| ||||| | ||||| | |||
Sbjct 7623 CAGCCCAACTCCA-CAAGAAGTCTATCAGCAACAAATTCAATATATTTCTTCATAAGATC 7565
Query 16105 ACAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATT 16164
||||||||| ||||| | | ||||| | ||| ||||| || || | || ||| || ||
Sbjct 7564 ACAGTTCATGCCTATCATTGCCACAGGCAATGCCTCTGTCAAGAATTCTTGTTCAATCTT 7505
Query 16165 AACCGCTTC---AATGAT 16179
||| || || ||||||
Sbjct 7504 AACAGCATCCCTAATGAT 7487
>seq780057
Length=4953
Score = 89.7 bits (98), Expect = 5e-13
Identities = 109/146 (75%), Gaps = 2/146 (1%)
Strand=Plus/Minus
Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTG-ACATT 15943
|| ||||||| ||| || | ||| ||||| |||| ||| |||| |||||| ||| |
Sbjct 1903 TTCAAAAATCGGCATCAAGTGTAAATACATTTTCTTCTTTGTTTGCCATAACACCACACT 1844
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
| | | || || | || |||| |||||||||||||| ||||| || || ||||| | |
Sbjct 1843 TCTGG-TACTCTCCTACCTTCTTCTCAAAGAAATTTGTCTTTCCCTCCAAGGAAATGTGT 1785
Query 16004 TCCATAAAATCAAAAGGATTTTTTGA 16029
||||| || ||||| || |||| |||
Sbjct 1784 TCCATGAAGTCAAATGGGTTTTCTGA 1759
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 454432539751200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |