Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq1252537 109 7e-19 >seq1252537 Length=300 Score = 109 bits (120), Expect = 7e-19 Identities = 136/180 (76%), Gaps = 6/180 (3%) Strand=Plus/Plus Query 87605 AATAAAATTAGCAGGTATAATAGAAGATCCATATTTTTGTGGTAAAGATGTATGTACAAT 87664 ||||| |||| |||| || |||||||||||||||||||| ||||||| |||| ||| Sbjct 42 AATAAGATTAAATGGTACCATTGAAGATCCATATTTTTGTGGAAAAGATGCATGTCAAAT 101 Query 87665 TTTAGGTTACAAAGATAAAGAACAAGCT-TTAAGAAAAAGAGTTAAATCAAAACATAAA- 87722 ||| |||||||||||| | |||||||| || ||||| | || ||| | ||| |||| Sbjct 102 TTTGGGTTACAAAGATTATAAACAAGCTCTTCAGAAACA-TGTGAAACCCAAATTTAAAC 160 Query 87723 AAG-TCTTTATCAGAACTATTTGAGAAAAAGTTGCCTGTCGTGACGACAGGCAACTTTTT 87781 ||| |||| || || || | | ||||||||| |||| | ||||| ||||| ||| Sbjct 161 AAGAACTTTTTC--AATTACATCAAAAAAAGTTGGGTGTCATTTCGACATCCAACTATTT 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667938960181440