Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq1341392 93.3 3e-14
seq741633 89.7 4e-13
>seq1341392
Length=603
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169
||| ||||||| || || || ||||| || ||||||||||| || | || ||| ||
Sbjct 496 TCTTAGTACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGACAGTGTACGACC 437
Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229
|||||| | ||| || || || |||| || || |||||||| || | |||||||||
Sbjct 436 ATCTTCGAGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGATCTGGTGGAATGCCTTCCTT 377
Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289
||| ||| | |||||| | | | | |||||| || || ||| | || ||
Sbjct 376 ATCCTGAATCTTCGCCTTGACATTTTCTATAGTGTCTGAGGCTTCAACTTCCAATGTTAT 317
Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| | ||||| || | || |||||||| || |||||
Sbjct 316 GGTCTTGCCTGTGAGGGTCTTTACAAATATCTGCAT 281
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169
|||||| || | |||||| || || || |||||||| |||||||| | || ||| |
Sbjct 268 TCTAAGGACAAGGTGAAGGGTGGACTCCTTTTGAATATTGTAGTCAGACAATGTGCGGCC 209
Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229
|||||||| || || || ||| |||| || || ||||| || || | ||||||||
Sbjct 208 ATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGTGGAATACCTTCCTT 149
Query 18230 ATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGA 18288
||| ||| | | || ||||| | | ||| ||||| | ||| ||||| |||||
Sbjct 148 ATCCTGAATCT-TGGCTTTGACATTTTCAATGGTGTCTGATGCCTCTACTTCAAGGGTGA 90
Query 18289 TGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| | ||||| |||| || || || || || |||||
Sbjct 89 TTGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 53
>seq741633
Length=11487
Score = 89.7 bits (98), Expect = 4e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||||| || |||||||| ||||| || ||||| | | ||| | ||||
Sbjct 11359 AGCACCAAATGAAGAGTGGATTCTTTCTGAATATTATAGTCCGAAAGTGTACGTCCATCT 11300
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232
||||| |||||||| ||| |||| |||| |||||||| ||| | ||||||||||||
Sbjct 11299 TCCAACTGTTTGCCTGCAAAGATGAGTCGCTGTTGATCTGGGGGAATGCCTTCCTTATC 11241
Score = 87.8 bits (96), Expect = 1e-12
Identities = 151/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169
||| ||||||| || || || ||||| || ||||||||||| || | || ||| ||
Sbjct 8114 TCTTAGTACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGACAGTGTACGACC 8055
Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229
|||||| | ||| || || || |||| || || ||||| || || | ||||||||
Sbjct 8054 ATCTTCGAGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGGTCTGGTGGAATACCTTCCTT 7995
Query 18230 ATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGA 18288
||| ||| | | || ||||| | | ||| ||||| | ||| ||||| |||||
Sbjct 7994 ATCCTGAATCT-TGGCTTTGACATTTTCAATGGTGTCTGATGCCTCTACTTCAAGGGTGA 7936
Query 18289 TGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| | ||||| |||| || || || || || |||||
Sbjct 7935 TTGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 7899
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
||||| | ||||| || || | |||||| || ||||| ||||||||||| ||||| | |
Sbjct 8638 CCTCCTCTAAGTCTGAGCACAAGGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCTGAC 8579
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| || | |||||| ||||| || || ||| | |||||||| || ||||| ||
Sbjct 8578 AAAGTACGGCCATCTTCTAATTGCTTTCCTGCAAATATAAGTCTCTGCTGATCAGGTGGG 8519
Query 18219 ACGCCTTCCTTATC 18232
| |||||||||||
Sbjct 8518 ATCCCTTCCTTATC 8505
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
||||| | || || || |||| || ||||| |||||||| || || |||||||| |
Sbjct 9322 CCTCCTCTGAGCCTCAGCACCAAATGTAGTGTAGATTCTTTCTGGATATTGTAGTCTGAA 9263
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| || | ||| || | ||||||||| ||| | || | ||| || || || ||
Sbjct 9262 AGAGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGTGGG 9203
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| |||||||||||| ||||| |||| || || | ||| ||||||| | ||
Sbjct 9202 ATGCCTTCCTTATCTTGAATTT-TTGCTTTTACATTCTCAATAGTGTCAGATGCTTCAAC 9144
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| | || ||| |||| || || | |||||||||||||| |||||
Sbjct 9143 CTCTAATGTTATGGTTTTCCCTGTAAGAGTTTTTACAAAAATCTGCAT 9096
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 18116 TACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTC 18175
||||| ||| || || ||||| || ||||| ||||| || | | ||| | | ||||||
Sbjct 8336 TACCAGGTGCAGGGTAGATTCCTTCTGAATATTGTAATCAGATAGAGTTCTCCCATCTTC 8277
Query 18176 CAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGC 18235
| ||||||||| ||| | || ||||| || ||||| || | |||||||||||
Sbjct 8276 GAGTTGTTTGCCAGCAAAAATCAGTCTCTGCTGATCAGGTGGGATCCCTTCCTTATCCTG 8217
Query 18236 AATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTT 18295
||||| ||| || | ||| || ||| | ||| ||| | |||||| ||||
Sbjct 8216 AATTTTCGCCTTCACATTCTCAATTGTATCAGATGCCTCTACTTCCAATGTGATGGTTTT 8157
Query 18296 GCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| || | ||| || || || || |||||
Sbjct 8156 ACCAGTTAGTGTCTTAACGAATATCTGCAT 8127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 372883038123540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |