Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq1341392 93.3 3e-14 seq741633 89.7 4e-13 >seq1341392 Length=603 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| ||||||| || || || ||||| || ||||||||||| || | || ||| || Sbjct 496 TCTTAGTACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGACAGTGTACGACC 437 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||| | ||| || || || |||| || || |||||||| || | ||||||||| Sbjct 436 ATCTTCGAGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGATCTGGTGGAATGCCTTCCTT 377 Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 ||| ||| | |||||| | | | | |||||| || || ||| | || || Sbjct 376 ATCCTGAATCTTCGCCTTGACATTTTCTATAGTGTCTGAGGCTTCAACTTCCAATGTTAT 317 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | | ||||| || | || |||||||| || ||||| Sbjct 316 GGTCTTGCCTGTGAGGGTCTTTACAAATATCTGCAT 281 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 |||||| || | |||||| || || || |||||||| |||||||| | || ||| | Sbjct 268 TCTAAGGACAAGGTGAAGGGTGGACTCCTTTTGAATATTGTAGTCAGACAATGTGCGGCC 209 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||||| || || || ||| |||| || || ||||| || || | |||||||| Sbjct 208 ATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGTGGAATACCTTCCTT 149 Query 18230 ATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGA 18288 ||| ||| | | || ||||| | | ||| ||||| | ||| ||||| ||||| Sbjct 148 ATCCTGAATCT-TGGCTTTGACATTTTCAATGGTGTCTGATGCCTCTACTTCAAGGGTGA 90 Query 18289 TGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | | ||||| |||| || || || || || ||||| Sbjct 89 TTGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 53 >seq741633 Length=11487 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||||| || |||||||| ||||| || ||||| | | ||| | |||| Sbjct 11359 AGCACCAAATGAAGAGTGGATTCTTTCTGAATATTATAGTCCGAAAGTGTACGTCCATCT 11300 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| |||||||| ||| |||| |||| |||||||| ||| | |||||||||||| Sbjct 11299 TCCAACTGTTTGCCTGCAAAGATGAGTCGCTGTTGATCTGGGGGAATGCCTTCCTTATC 11241 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| ||||||| || || || ||||| || ||||||||||| || | || ||| || Sbjct 8114 TCTTAGTACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGACAGTGTACGACC 8055 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||| | ||| || || || |||| || || ||||| || || | |||||||| Sbjct 8054 ATCTTCGAGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGGTCTGGTGGAATACCTTCCTT 7995 Query 18230 ATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGA 18288 ||| ||| | | || ||||| | | ||| ||||| | ||| ||||| ||||| Sbjct 7994 ATCCTGAATCT-TGGCTTTGACATTTTCAATGGTGTCTGATGCCTCTACTTCAAGGGTGA 7936 Query 18289 TGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | | ||||| |||| || || || || || ||||| Sbjct 7935 TTGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 7899 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| | ||||| || || | |||||| || ||||| ||||||||||| ||||| | | Sbjct 8638 CCTCCTCTAAGTCTGAGCACAAGGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCTGAC 8579 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||| ||||| || || ||| | |||||||| || ||||| || Sbjct 8578 AAAGTACGGCCATCTTCTAATTGCTTTCCTGCAAATATAAGTCTCTGCTGATCAGGTGGG 8519 Query 18219 ACGCCTTCCTTATC 18232 | ||||||||||| Sbjct 8518 ATCCCTTCCTTATC 8505 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| | || || || |||| || ||||| |||||||| || || |||||||| | Sbjct 9322 CCTCCTCTGAGCCTCAGCACCAAATGTAGTGTAGATTCTTTCTGGATATTGTAGTCTGAA 9263 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | ||| || | ||||||||| ||| | || | ||| || || || || Sbjct 9262 AGAGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGTGGG 9203 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | |||||||||||| ||||| |||| || || | ||| ||||||| | || Sbjct 9202 ATGCCTTCCTTATCTTGAATTT-TTGCTTTTACATTCTCAATAGTGTCAGATGCTTCAAC 9144 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | || ||| |||| || || | |||||||||||||| ||||| Sbjct 9143 CTCTAATGTTATGGTTTTCCCTGTAAGAGTTTTTACAAAAATCTGCAT 9096 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 18116 TACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTC 18175 ||||| ||| || || ||||| || ||||| ||||| || | | ||| | | |||||| Sbjct 8336 TACCAGGTGCAGGGTAGATTCCTTCTGAATATTGTAATCAGATAGAGTTCTCCCATCTTC 8277 Query 18176 CAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGC 18235 | ||||||||| ||| | || ||||| || ||||| || | ||||||||||| Sbjct 8276 GAGTTGTTTGCCAGCAAAAATCAGTCTCTGCTGATCAGGTGGGATCCCTTCCTTATCCTG 8217 Query 18236 AATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTT 18295 ||||| ||| || | ||| || ||| | ||| ||| | |||||| |||| Sbjct 8216 AATTTTCGCCTTCACATTCTCAATTGTATCAGATGCCTCTACTTCCAATGTGATGGTTTT 8157 Query 18296 GCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || | ||| || || || || ||||| Sbjct 8156 ACCAGTTAGTGTCTTAACGAATATCTGCAT 8127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 372883038123540