Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_003278.1
Length=35580
Score E
Sequences producing significant alignments: (Bits) Value
seq1193780 136 9e-28
seq1253619 134 3e-27
>seq1193780
Length=224
Score = 136 bits (150), Expect = 9e-28
Identities = 126/160 (79%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 28855 CCTCAAGACCGCGCGTCATGAGGGCGCGCTGCTGATCGCCGAGAGTGCCGCCGAGAAGGC 28914
||||||| |||| || | ||||| |||||| | ||||| | ||||| ||||||||
Sbjct 224 CCTCAAGGAGGCGCAGTATCACGGCGCCCTGCTGCTGGCCGACACCGCCGCGGAGAAGGC 165
Query 28915 CCTGCTGATGTACGACTGGGGCAAGCGCGGTGAATTCCACTTCCGCTTCGCCAACCGCCT 28974
||||||||||||| ||| || ||||| |||||||||||| ||||| | ||||||
Sbjct 164 GGTGCTGATGTACGAATGGCGCGAGCGCCACGAATTCCACTTCACCTTCGAGAGCCGCCT 105
Query 28975 CTACTGGTTCAAGCTGGATATCGAGAAGTTCAACAAGGCC 29014
||||||||||||||| || | || |||| ||||||||||
Sbjct 104 CTACTGGTTCAAGCTCGACCTGGACAAGTACAACAAGGCC 65
>seq1253619
Length=302
Score = 134 bits (148), Expect = 3e-27
Identities = 181/246 (74%), Gaps = 26/246 (11%)
Strand=Plus/Minus
Query 4290 CCTACAATCCCGCTTGATTGCTGGGCCGCGCGCGCGTCCCGAACATGCCCCTCATTGCC- 4348
||||||| || | | |||||||| |||||||||||||||| |||||||||||| |||
Sbjct 247 CCTACAAAACCCCCTCGTTGCTGGGACGCGCGCGCGTCCCGACCATGCCCCTCATCGCCC 188
Query 4349 ATGCAC-CCCGCATCAGCCGCATTGAGGACTCCCGGCATG---------AAGA------A 4392
| |||| ||||| | |||| | |||||| ||||||||| |||| |
Sbjct 187 AAGCACTCCCGC-TAAGCCTC--TGAGGATCCCCGGCATGGCCGACCCCAAGACCCCCAA 131
Query 4393 ATTCCGCAGCAAATGGTTCCGCATCGCCGTCGAAGGGGCGACCACGGACGGCCGCAACAT 4452
| ||||| | ||||| ||||||||||||| || |||| || ||||| | ||
Sbjct 130 ACTCCGCTCTCCTTTCTTCCGTGTCGCCGTCGAAGGTGCCACCAGCGATGGCCGTCAGAT 71
Query 4453 CGAGCGCGACTGGATCGAGCAGATGGCCGCG--CAG-TACGACCCGAACACCTACGGCGC 4509
|||||||| ||||||||||||| |||||| ||| ||| |||| || |||||||||||
Sbjct 70 CGAGCGCGCCTGGATCGAGCAG---GCCGCGGCCAGCTACAACCCCAAGACCTACGGCGC 14
Query 4510 GCGGAT 4515
|| ||
Sbjct 13 TCGCAT 8
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 111846952894768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |