Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_003278.1 Length=35580 Score E Sequences producing significant alignments: (Bits) Value seq1193780 136 9e-28 seq1253619 134 3e-27 >seq1193780 Length=224 Score = 136 bits (150), Expect = 9e-28 Identities = 126/160 (79%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 28855 CCTCAAGACCGCGCGTCATGAGGGCGCGCTGCTGATCGCCGAGAGTGCCGCCGAGAAGGC 28914 ||||||| |||| || | ||||| |||||| | ||||| | ||||| |||||||| Sbjct 224 CCTCAAGGAGGCGCAGTATCACGGCGCCCTGCTGCTGGCCGACACCGCCGCGGAGAAGGC 165 Query 28915 CCTGCTGATGTACGACTGGGGCAAGCGCGGTGAATTCCACTTCCGCTTCGCCAACCGCCT 28974 ||||||||||||| ||| || ||||| |||||||||||| ||||| | |||||| Sbjct 164 GGTGCTGATGTACGAATGGCGCGAGCGCCACGAATTCCACTTCACCTTCGAGAGCCGCCT 105 Query 28975 CTACTGGTTCAAGCTGGATATCGAGAAGTTCAACAAGGCC 29014 ||||||||||||||| || | || |||| |||||||||| Sbjct 104 CTACTGGTTCAAGCTCGACCTGGACAAGTACAACAAGGCC 65 >seq1253619 Length=302 Score = 134 bits (148), Expect = 3e-27 Identities = 181/246 (74%), Gaps = 26/246 (11%) Strand=Plus/Minus Query 4290 CCTACAATCCCGCTTGATTGCTGGGCCGCGCGCGCGTCCCGAACATGCCCCTCATTGCC- 4348 ||||||| || | | |||||||| |||||||||||||||| |||||||||||| ||| Sbjct 247 CCTACAAAACCCCCTCGTTGCTGGGACGCGCGCGCGTCCCGACCATGCCCCTCATCGCCC 188 Query 4349 ATGCAC-CCCGCATCAGCCGCATTGAGGACTCCCGGCATG---------AAGA------A 4392 | |||| ||||| | |||| | |||||| ||||||||| |||| | Sbjct 187 AAGCACTCCCGC-TAAGCCTC--TGAGGATCCCCGGCATGGCCGACCCCAAGACCCCCAA 131 Query 4393 ATTCCGCAGCAAATGGTTCCGCATCGCCGTCGAAGGGGCGACCACGGACGGCCGCAACAT 4452 | ||||| | ||||| ||||||||||||| || |||| || ||||| | || Sbjct 130 ACTCCGCTCTCCTTTCTTCCGTGTCGCCGTCGAAGGTGCCACCAGCGATGGCCGTCAGAT 71 Query 4453 CGAGCGCGACTGGATCGAGCAGATGGCCGCG--CAG-TACGACCCGAACACCTACGGCGC 4509 |||||||| ||||||||||||| |||||| ||| ||| |||| || ||||||||||| Sbjct 70 CGAGCGCGCCTGGATCGAGCAG---GCCGCGGCCAGCTACAACCCCAAGACCTACGGCGC 14 Query 4510 GCGGAT 4515 || || Sbjct 13 TCGCAT 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111846952894768