Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq599987 113 4e-20
seq791531 89.7 5e-13
>seq599987
Length=38784
Score = 113 bits (124), Expect = 4e-20
Identities = 91/110 (83%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197
|||||||| |||||||| || || | | ||||||||||||||| ||||||||||||| |
Sbjct 15436 ACCTGAAATTCTCCAGACAAAACGCGGCGTGTATATATATTGCTGGTATATGGTTCAAAG 15495
Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGC 37247
|||||||| || | | |||||| | || |||||||| |||||||||||
Sbjct 15496 GACTCATTGTTTCCAAGTATTTGGGCAGTCGATGCAGTTGGCATTGGTGC 15545
Score = 104 bits (114), Expect = 2e-17
Identities = 129/177 (73%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 37377 ATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATA 37436
||| ||||| ||||| || || | |||||||| || || | ||||| || ||||
Sbjct 16303 ATAAGTCTCGTAAGGACCCAAAGCCTCTGCTAGTTCACAGCTTGCTTCTAAAGCTCCATA 16362
Query 37437 ATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATA 37496
|| |||||||| || || || |||||||| ||| ||| ||||| || || |||| |||
Sbjct 16363 GTAGATTGTTTCAAATATCTGGATATTTAACTTTTGTGCCTCTTCACTCTCAAATGGATA 16422
Query 37497 GCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATG 37553
| || | |||||| |||| || | || |||||||||||||| || || | |||
Sbjct 16423 CCTCATAAGAATAAACGCATCGGCAAGGCCTTGAACACCGATACCAATAGGACGATG 16479
>seq791531
Length=8839
Score = 89.7 bits (98), Expect = 5e-13
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 11900 TATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAAT 11959
|||||||| || | | ||||||||| || ||||| | ||| |||||||| ||||| ||
Sbjct 6997 TATGTATCAATGAGAAGACTATACATCTCAGAATGCACATTCTCCATAGCAATTTGGAAG 6938
Query 11960 CCATAGAAACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTC 12019
||||||||||||| ||| || | || || || | || ||||| | | ||
Sbjct 6937 CCATAGAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTGAACCTTTCAACCAGGTTT 6878
Query 12020 TCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATG 12063
|| || ||||| |||||||||| || || || ||||| | |||
Sbjct 6877 TCGTTAACAATGCCATCACTAGCAGCGAAGAAAGCTAGAACATG 6834
Score = 87.8 bits (96), Expect = 2e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 12116 TTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTTTATACATTTTC 12175
|| |||||||||||||||||| | ||||| ||| || ||| || ||||||||| |
Sbjct 6576 TTCGATAAATCTACTTCTTCAGCCGTCCAGAAAGACGCTTCTGCTTTTTTATACATAGCC 6517
Query 12176 CAGATATCATGATACTTAATAGGGAAAATAACGAACCT 12213
|| ||||||||||||| ||| |||||||| || || ||
Sbjct 6516 CAAATATCATGATACTGAATTGGGAAAATGACAAATCT 6479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 460340304252480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |