Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq600855 104 2e-17 >seq600855 Length=4662 Score = 104 bits (114), Expect = 2e-17 Identities = 213/317 (67%), Gaps = 0/317 (0%) Strand=Plus/Minus Query 21018 GTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTC 21077 |||| || || |||||||| | ||||| || || || || ||||| || || || || Sbjct 2567 GTCAATAGAGCATAGCTGGCTACATTAAATGGAACACCAAGTCCCATATCTGCTGATCTT 2508 Query 21078 TGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAAAACGTGACAA 21137 ||||| |||||||| ||||||||||| || || ||||| || ||| || ||| Sbjct 2507 TGGTATAGCTGGCATGACAGCTCCCCATTTGCTACATAAAATTGTACCAAGCAATGGCAA 2448 Query 21138 GGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGATGCGCCGA 21197 || || |||||||| | | | || ||||||||||| ||||| | |||||| ||| Sbjct 2447 GGGGGCAGAGCCATAAGGCCCAAATCTCGTGGGTTCCACGCACACATGATGATGCGGCGA 2388 Query 21198 TCGTGGGGCCGCCTGTTAATTAGATCCACCACGTAACGCAGCTGGTCCACCCCCTGACCC 21257 || | || || | | | | ||| | | || || || || || | ||| Sbjct 2387 TCATCTGGATTTGTGCGTAGTGTGTGTATCACATGCTGAAGTTGATCAACACCTTTGCCC 2328 Query 21258 TCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTAC 21317 || ||||||| || | || ||| || || ||||| || | |||||| || || ||| Sbjct 2327 TCATAGTTGGAATCAGTTCCTTCGTAATCTGCTCCAAAGTGGCGCCACTGAAAACCATAC 2268 Query 21318 ACCGGCCCCAGATCGCC 21334 || || || || || || Sbjct 2267 ACTGGACCAAGGTCACC 2251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420490147508160