Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq600855 104 2e-17
>seq600855
Length=4662
Score = 104 bits (114), Expect = 2e-17
Identities = 213/317 (67%), Gaps = 0/317 (0%)
Strand=Plus/Minus
Query 21018 GTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTC 21077
|||| || || |||||||| | ||||| || || || || ||||| || || || ||
Sbjct 2567 GTCAATAGAGCATAGCTGGCTACATTAAATGGAACACCAAGTCCCATATCTGCTGATCTT 2508
Query 21078 TGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAAAACGTGACAA 21137
||||| |||||||| ||||||||||| || || ||||| || ||| || |||
Sbjct 2507 TGGTATAGCTGGCATGACAGCTCCCCATTTGCTACATAAAATTGTACCAAGCAATGGCAA 2448
Query 21138 GGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGATGCGCCGA 21197
|| || |||||||| | | | || ||||||||||| ||||| | |||||| |||
Sbjct 2447 GGGGGCAGAGCCATAAGGCCCAAATCTCGTGGGTTCCACGCACACATGATGATGCGGCGA 2388
Query 21198 TCGTGGGGCCGCCTGTTAATTAGATCCACCACGTAACGCAGCTGGTCCACCCCCTGACCC 21257
|| | || || | | | | ||| | | || || || || || | |||
Sbjct 2387 TCATCTGGATTTGTGCGTAGTGTGTGTATCACATGCTGAAGTTGATCAACACCTTTGCCC 2328
Query 21258 TCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTAC 21317
|| ||||||| || | || ||| || || ||||| || | |||||| || || |||
Sbjct 2327 TCATAGTTGGAATCAGTTCCTTCGTAATCTGCTCCAAAGTGGCGCCACTGAAAACCATAC 2268
Query 21318 ACCGGCCCCAGATCGCC 21334
|| || || || || ||
Sbjct 2267 ACTGGACCAAGGTCACC 2251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420490147508160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |