Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq599987 145 1e-29
seq791531 104 3e-17
>seq599987
Length=38784
Score = 145 bits (160), Expect = 1e-29
Identities = 164/218 (75%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 79059 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCAC 79118
||| ||||||||||||||||| || | || || || ||||| |||||||||||||| |
Sbjct 15435 TACCTGAAATTCTCCAGACAAAACGCGGCGTGTATATATATTGCTGGTATATGGTTCAAA 15494
Query 79119 CGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAA 79178
|| ||||| ||||| | ||||| ||||| ||||| |||||||| ||||||| ||| |
Sbjct 15495 GGACTCATTGTTTCCAAGTATTTGGGCAGTCGATGCAGTTGGCATTGGTGCCAACAAGAG 15554
Query 79179 ACTATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGA 79236
| || | || ||| |||| | | ||||| ||||| |||| |||||||||||||
Sbjct 15555 AGAGTTGCGAACACC--ATGAACAGCAATTTTTTCTTTGAGAGCAGCCCAATCCCAAAGT 15612
Query 79237 TCAGACGGGACAACATTCCAAAGATCATATTGTAGAAT 79274
|| || ||||| ||| | |||||| |||| |||
Sbjct 15613 GAAGTAGGTTTAACATCCCACATATCATACTGTAAAAT 15650
Score = 104 bits (114), Expect = 3e-17
Identities = 111/147 (76%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 78786 CCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATT 78845
|||| | || |||||||| ||||| || |||| | || || || ||||| || ||
Sbjct 2112 CCATGCATAAAAATGCATTGATGTTAGCTTTCCATAATTTGGCTCAGCAATATGTATGTT 2171
Query 78846 CATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTT 78905
| ||| ||||| ||||| ||||| ||||| || || || |||||||| || || || ||
Sbjct 2172 GAGAGACTGACTCTGATCAATGAAAGCTCCTCTATCAGCTGCCATTTTGATAATTGTTTT 2231
Query 78906 TTGTGGAATTTCCCAAATAGTTTTATA 78932
|| ||||||||||| | |||||||||
Sbjct 2232 CTGAGGAATTTCCCACACAGTTTTATA 2258
Score = 104 bits (114), Expect = 3e-17
Identities = 114/152 (75%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 79324 TCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTA 79383
|| |||| |||||| || || ||||| ||||| || || || ||||| || |||| ||
Sbjct 16328 TCTGCTAGTTCACAGCTTGCTTCTAAAGCTCCATAGTAGATTGTTTCAAATATCTGGATA 16387
Query 79384 TTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCT 79443
|| | | |||||| ||| || ||||||||||| | | ||||||||||| || ||
Sbjct 16388 TTTAACTTTTGTGCCTCTTCACTCTCAAATGGATACCTCATAAGAATAAACGCATCGGCA 16447
Query 79444 AATCCTTGAACACCAATACCGATAGGTCTATG 79475
| ||||||||||| ||||| ||||| | |||
Sbjct 16448 AGGCCTTGAACACCGATACCAATAGGACGATG 16479
Score = 104 bits (114), Expect = 3e-17
Identities = 162/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 80089 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 80148
|| ||||| |||||||| | ||||| | || || ||||| || | |||||| ||||
Sbjct 36365 TTATTTCCACCCTGATCCACATATCTGGAAGTATTGTTATATACACGCAACATAGGAACC 36424
Query 80149 ATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTA 80208
| ||||||||||||||||||||| || | || || |||||| ||||| ||| |
Sbjct 36425 AGACCATTGGATGTACCATTGGTGCCAGCAATGTAACTTCCAGCAGCACGGATA----CA 36480
Query 80209 ATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 80264
|| || || || || || ||||| ||| ||||| | || ||| | || || ||
Sbjct 36481 ATGGACGCTAAGGCCAATACCACCTGCAGATTTGGAGATCATGGCACATTGCTTCAAAGT 36540
Query 80265 ATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCT 80315
|||||| || || || || || || || ||||| | || ||||||||
Sbjct 36541 ATCATAAATACCTTCAATACTGTCCTCCTTCATGCACAACAGGAAACAGCT 36591
>seq791531
Length=8839
Score = 104 bits (114), Expect = 3e-17
Identities = 87/107 (81%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 50446 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 50505
|| |||| |||||||||||| | ||||| || || || ||||| |||||||||||| |
Sbjct 6576 TTCGATAAATCTACTTCTTCAGCCGTCCAGAAAGACGCTTCTGCTTTTTTATACATAGCC 6517
Query 50506 CAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATT 50552
|| || |||||||| || ||||||||||| |||||||| |||| ||
Sbjct 6516 CAAATATCATGATACTGAATTGGGAAAATGACAAATCTTCTTGGGTT 6470
Score = 95.1 bits (104), Expect = 2e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 50220 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 50279
||| |||| || ||||| || | |||||||||||| || ||||| | || || || ||
Sbjct 7007 ATCCTTAATGTATGTATCAATGAGAAGACTATACATCTCAGAATGCACATTCTCCATAGC 6948
Query 50280 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 50339
|| || || || ||||||||||| || || || | || |||||| || || | |||
Sbjct 6947 AATTTGGAAGCCATAGAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTGAACCTTTC 6888
Query 50340 AGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 50399
| | | ||||| || || || || ||||| || || || || || | ||||| ||
Sbjct 6887 AACCAGGTTTTCGTTAACAATGCCATCACTAGCAGCGAAGAAAGCTAGAACATGGGAAAT 6828
Query 50400 AAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAAT 50434
||||| |||| | ||| |||| | | |||||
Sbjct 6827 GAAATGCCTTTCTTCAGGTTTTAGCTGCTGCCAAT 6793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 705721613726880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |