Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq791531 102 8e-17
>seq791531
Length=8839
Score = 102 bits (112), Expect = 8e-17
Identities = 120/160 (75%), Gaps = 2/160 (1%)
Strand=Plus/Minus
Query 14141 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14200
||||||||||||||| || | |||||||| ||||| || | || |||||||| || ||
Sbjct 7001 AATGTATGTATCAATGAGAAGACTATACATCTCAGAATGCACATTCTCCATAGCAATTTG 6942
Query 14201 AAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCC-GAGTAAAATCTTTCGGCCA 14259
|| ||||| || ||||| ||||| | ||| ||||| || | || ||||| |||
Sbjct 6941 GAAGCCATAGAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTGAAC-CTTTCAACCA 6883
Query 14260 AATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGC 14299
||||| ||||| || ||||||||||| || || || ||
Sbjct 6882 GGTTTTCGTTAACAATGCCATCACTAGCAGCGAAGAAAGC 6843
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
|||||||||| ||||||||| || |||||| | |||||||| || |||| || |
Sbjct 7339 CCTCATCTCTTGAAATAAGTTCATTGCTAAATGTAAGACCTGGCATTAAACCTCTCTTCT 7280
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| | ||| || || || ||||| || || |||||||| || || || |||||||| |
Sbjct 7279 TAAGCCAGAAAATAGCTGCAAAACTGCCAGAGAAGAATATGCCTTCCACAGCAGCAAATG 7220
Query 14014 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14073
| |||| || ||| |||| | || || | | ||||| | ||||| ||||
Sbjct 7219 CAATTACACGCTCTGCAAATGTGGCAGATTCATCAGCAATCCACCTGAGTGCCCAGTCAG 7160
Query 14074 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAA 14113
||||| || | | | || |||||||||||||| ||
Sbjct 7159 CCTTTTTCTTTACACATGGCAAAGTTTCAATAGCATTGAA 7120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471347799472800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |