Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq791531 105 6e-18 >seq791531 Length=8839 Score = 105 bits (116), Expect = 6e-18 Identities = 121/160 (76%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 13929 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTG 13988 ||||||||||||||| || | |||||||| ||||| || | || || ||||| || || Sbjct 7001 AATGTATGTATCAATGAGAAGACTATACATCTCAGAATGCACATTCTCCATAGCAATTTG 6942 Query 13989 AAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC-CGAGTAAAATCTTTCTGCCA 14047 || ||||| |||||||| ||||| | ||| || || || | || ||||| ||| Sbjct 6941 GAAGCCATAGAAACATCTTGCTTCAGTTACTTGAACTTCTTGACT-GAACCTTTCAACCA 6883 Query 14048 AGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGC 14087 |||||| |||||||| ||||||||||| || || || || Sbjct 6882 GGTTTTCGTTAACAATGCCATCACTAGCAGCGAAGAAAGC 6843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470228499758880