Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq302911 113 4e-20
seq302910 109 5e-19
seq741633 100 3e-16
seq1341392 95.1 1e-14
>seq302911
Length=9965
Score = 113 bits (124), Expect = 4e-20
Identities = 139/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 142995 CTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGA 143054
||||||||||||||||||| || |||| ||||| || ||||| |||||| | |
Sbjct 1226 CTTTTTGTATGTTGTAATCTGACAAAGTGCGACCATCTTCCAGCTGTTTGCCAGCAAATA 1285
Query 143055 TCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTT 143114
||||||| |||||||| || || || ||||||||||| ||| ||| ||| | | ||
Sbjct 1286 TCAGACGCTGCTGATCAGGTGGAATACCTTCTTTGTCTTGAATCTTTGCTTTAACATTTT 1345
Query 143115 CCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGA 143174
| | || || | ||||| ||||| | || | ||||| || || ||||| || ||||
Sbjct 1346 CAATTGTATCTGAAGGTTCAACTTCCAATGTTATTGTCTTCCCCGTTAATGTCTTCACGA 1405
Query 143175 ATATTTGCAT 143184
| || |||||
Sbjct 1406 AGATCTGCAT 1415
Score = 86.0 bits (94), Expect = 6e-12
Identities = 135/191 (71%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 142995 CTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAG 143053
|||| ||||| |||||||| || || | || | ||||| | ||||| || ||| |
Sbjct 824 CTTTCTGTATATTGTAATCTGACAGAGTCCGTCCA-TCTTCCAACTGTTTCCCTGCAAAA 882
Query 143054 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 143113
|| || | ||||| || || || ||||||||||| || ||| ||| ||| | | |
Sbjct 883 ATTAGCCTCTGCTGGTCTGGTGGAATGCCTTCTTTATCCTGAATCTTTGCTTTGACATTT 942
Query 143114 TCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 143173
|| | ||||| | || || ||||| | || | || ||||| ||||| ||||| ||
Sbjct 943 TCTATTGTGTCTGACGGCTCAACTTCTAATGTTATTGTTTTGCCAGTCAACGTTTTCACA 1002
Query 143174 AATATTTGCAT 143184
|||||||||||
Sbjct 1003 AATATTTGCAT 1013
>seq302910
Length=12142
Score = 109 bits (120), Expect = 5e-19
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 142995 CTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGA 143054
||||||||||||||||||| | || || || || ||||||||||||||| |||
Sbjct 11150 CTTTTTGTATGTTGTAATCTGAGAGAGTTCTTCCATCCTCAAGTTGTTTACCAGCAAAGA 11209
Query 143055 TCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTT 143114
| | || || ||||| || ||||| ||||||||||| ||||||| ||||| | ||
Sbjct 11210 TTAATCGCTGTTGATCTGGCGGTATTCCTTCTTTGTCTTGAATTTTTGCTTTTACATTTT 11269
Query 143115 CCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGA 143174
| | ||||| | || || ||||| | || | || || || |||| |||||||| |
Sbjct 11270 CAATTGTGTCTGATGGCTCAACTTCCAATGTTATTGTTTTCCCTGTCAGAGTTTTTACAA 11329
Query 143175 ATATTTGCAT 143184
| || |||||
Sbjct 11330 AAATCTGCAT 11339
>seq741633
Length=11487
Score = 100 bits (110), Expect = 3e-16
Identities = 143/199 (72%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACC 143046
|||||||| || || ||||||||||| || || | || | ||||| ||||| |||||
Sbjct 9748 GTAGATTCCTTCTGAATGTTGTAATCCGACAGGGTTCGTCCA-TCTTCCAGTTGCTTACC 9690
Query 143047 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTT 143106
|||| |||| ||||| ||||| || ||||| |||||||| ||||| || ||| ||
Sbjct 9689 AGCAAAGATGAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTTGCCTT 9630
Query 143107 TAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 143166
| | ||| | ||||| | | |||||| || | || | |||||||| || | ||
Sbjct 9629 CACATTTTCAATAGTGTCTGAAGCTTCTACCTCCAGGGTAATTGTCTTGCCAGTAAGGGT 9570
Query 143167 TTTTACGAATATTTGCATA 143185
|| || || || ||||||
Sbjct 9569 CTTCACAAAAATCTGCATA 9551
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|||||||| || | ||| || | ||| | || ||||| || || || |||||||| |
Sbjct 8866 CCTCCTCGCAACCTCAACACCAGATGGAGAGTCGATTCCTTCTGAATATTGTAATCAGAC 8807
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| |||| ||||| || || ||||||||| | || ||||||||||| || || ||
Sbjct 8806 AGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATGAGACGTTGCTGGTCTGGTGGA 8747
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| || ||| || | | ||| | ||||| | | ||| |||
Sbjct 8746 ATTCCTTCTTTGTCCTGGATCTTTGCCTTCACATTTTCAATTGTGTCTGAAGCTTCCACT 8687
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | || | |||||||| || | || ||||| || || |||||
Sbjct 8686 TCCAGTGTGATGGTCTTGCCTGTGAGGGTCTTTACAAAAATCTGCAT 8640
Score = 93.3 bits (102), Expect = 4e-14
Identities = 85/105 (81%), Gaps = 2/105 (2%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACC 143046
|||||||| || || ||||||||||| || |||| || | ||||| || || || ||
Sbjct 11116 GTAGATTCCTTCTGAATGTTGTAATCTGACAGGGTGCGTCCA-TCTTCAAGCTGCTTGCC 11058
Query 143047 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091
|||| |||| |||||||||||||| ||||| || |||||||||||
Sbjct 11057 AGCAAAGATGAGACGTTGCTGATCTGGAGGAATCCCTTCTTTGTC 11013
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035
|| ||||| | |||||||| || || ||||||||||| || ||| | ||||||
Sbjct 8107 ACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGACAGTGTACGACCATCTTCG 8048
Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095
||||| || || || ||||||| | || || || || || || ||||| || || |
Sbjct 8047 AGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGGTCTGGTGGAATACCTTCCTTATCCTGA 7988
Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155
|| || ||| | | ||| | ||||| | | |||||||||| || | ||||||
Sbjct 7987 ATCTTGGCTTTGACATTTTCAATGGTGTCTGATGCCTCTACTTCAAGGGTGATTGTCTTG 7928
Query 143156 CCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188
|| |||| || || ||||| || |||||| ||
Sbjct 7927 CCAGTCAGGGTCTTCACGAAGATCTGCATACCT 7895
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| || | || ||| ||||| | |||||||| ||||| |||||||||||
Sbjct 10462 CCACCTCTTAGCCTCAGAACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAATCTGAT 10403
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | ||||| || ||| |||| || || || ||||| |||||
Sbjct 10402 AAGGTCCTTCCATCTTCCAACTGTTTTCCTGCAAAGATGAGTCGCTGTTGATCTGGAGGA 10343
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|||||||| ||||| || ||| ||| | | || | ||||| | | ||| ||
Sbjct 10342 ATGCCTTCCTTGTCTTGGATCTTTGCTTTGACATTCTCAATGGTGTCAGAAGCTTCCACC 10283
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | |||||||| || | || || || || || ||||||
Sbjct 10282 TCCAGAGTAATTGTCTTGCCAGTAAGAGTCTTCACAAAAATCTGCATA 10235
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||| || | | || |||||||| | || ||||| || || |||||||||||
Sbjct 10690 CCTCCACGCAGCCTCAGCACTAAATGCAAAGTGGATTCCTTCTGAATGTTGTAATCAGAT 10631
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| || || || |||||| |||| ||||| || || || |||||
Sbjct 10630 AAGGTCCTTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGAGGG 10571
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
||||||||||| || ||| || ||| | | ||| | ||||| | | || |||
Sbjct 10570 ATGCCTTCTTTATCTTGAATCTTAGCTTTCACATTTTCAATTGTGTCAGATGCCTCAACT 10511
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | || | || ||||| || | ||| || || || ||||||||
Sbjct 10510 TCCAATGTAATTGTTTTGCCAGTAAGTGTCTTCACAAAAATTTGCAT 10464
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| ||||| || | || || | ||| | || |||||||| || ||||||||||| |
Sbjct 9550 CCACCTCGCAATCTCAGCACCAGATGCAAAGTGGATTCTTTCTGAATGTTGTAATCAGAC 9491
Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
| || | || | ||||| ||||| || || ||| |||| || | || || || || ||
Sbjct 9490 AGGGTACGTCCA-TCTTCCAGTTGCTTGCCTGCAAAGATTAGCCTCTGTTGGTCAGGTGG 9432
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
||| ||||| || || ||||||| || | | || | || || | | ||| ||
Sbjct 9431 TATTCCTTCCTTATCCTGAATTTTTGCCTTAACATTCTCAATTGTATCTGAAGCTTCAAC 9372
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | ||| | |||||||| |||||||| || || || || |||||
Sbjct 9371 ATCCAAAGTTATAGTCTTGCCCGTCAATGTCTTCACAAAGATCTGCAT 9324
Score = 82.4 bits (90), Expect = 8e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|||||||| || || || |||||||| | || ||| |||||||||||||| |||
Sbjct 8323 GTAGATTCCTTCTGAATATTGTAATCAGATAGAGTTCTCCCATCTTCGAGTTGTTTGCCA 8264
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
||| | ||||| | |||||||| || || || ||||| || || |||||| ||
Sbjct 8263 GCAAAAATCAGTCTCTGCTGATCAGGTGGGATCCCTTCCTTATCCTGAATTTTCGCCTTC 8204
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | || || | | |||||||| | || | || || || || | |||
Sbjct 8203 ACATTCTCAATTGTATCAGATGCCTCTACTTCCAATGTGATGGTTTTACCAGTTAGTGTC 8144
Query 143168 TTTACGAATATTTGCATA 143185
|| |||||||| ||||||
Sbjct 8143 TTAACGAATATCTGCATA 8126
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
|||||||| | | || || ||||| | |||||||||||| || || ||||| ||
Sbjct 9323 GCCTCCTCTGAGCCTCAGCACCAAATGTAGTGTAGATTCTTTCTGGATATTGTAGTCTGA 9264
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
| |||| || || |||||||| |||||| | |||| | ||||| || || ||
Sbjct 9263 AAGAGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGTGG 9204
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
|||||||| || || ||||||| ||||| | || | ||||| | | ||| ||
Sbjct 9203 GATGCCTTCCTTATCTTGAATTTTTGCTTTTACATTCTCAATAGTGTCAGATGCTTCAAC 9144
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | || | || || || || | |||||||| || || |||||
Sbjct 9143 CTCTAATGTTATGGTTTTCCCTGTAAGAGTTTTTACAAAAATCTGCAT 9096
>seq1341392
Length=603
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035
|| ||||| | |||||||| || || ||||||||||| || ||| | ||||||
Sbjct 489 ACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGACAGTGTACGACCATCTTCG 430
Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095
||||| || || || ||||||| | || ||||| || || |||||||| || || |
Sbjct 429 AGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGATCTGGTGGAATGCCTTCCTTATCCTGA 370
Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155
|| || || | | ||| | ||||| | || ||| ||||| | || | ||||||
Sbjct 369 ATCTTCGCCTTGACATTTTCTATAGTGTCTGAGGCTTCAACTTCCAATGTTATGGTCTTG 310
Query 143156 CCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| || | || ||||| ||||| ||||||
Sbjct 309 CCTGTGAGGGTCTTTACAAATATCTGCATA 280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 498157542901440
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