Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq741633 107 1e-18
seq302910 105 4e-18
seq238538 87.8 1e-12
>seq741633
Length=11487
Score = 107 bits (118), Expect = 1e-18
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| |||| |||| |||||||| ||| | ||||| || || || ||||||||||||||
Sbjct 8867 ACCTCCTCGCAACCTCAACACCAGATGGAGAGTCGATTCCTTCTGAATATTGTAATCAGA 8808
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
|| | || | || |||| ||||| ||| ||| || | |||||||||||| | ||
Sbjct 8807 CAGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATGAGACGTTGCTGGTCTGGTGG 8748
Query 33262 TATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
|| |||||||| || | | | ||| || || ||| ||| ||||| | ||
Sbjct 8747 AATTCCTTCTTTGTCCTGGATCTTTGCC---TTCACATTTTCAATTGTGTCTGAAGCTTC 8691
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||||| || || || || || || || || ||||| ||||| |||||
Sbjct 8690 CACTTCCAGTGTGATGGTCTTGCCTGTGAGGGTCTTTACAAAAATCTGCAT 8640
Score = 105 bits (116), Expect = 4e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| ||||| | || || ||||||||| | ||| || ||||| || |||||||| || ||
Sbjct 9322 CCTCCTCTGAGCCTCAGCACCAAATGTAGTGTAGATTCTTTCTGGATATTGTAGTCTGAA 9263
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
| | || | || || | ||| || ||| ||| || || | |||||||| | ||
Sbjct 9262 AGAGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGTGGG 9203
Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322
|||||||| || || ||| |||||| | | ||| ||||| | || |||
Sbjct 9202 ATGCCTTCCTTATCTTGAATTTTTGCTTTTACATTCTCAATAGTGTCAGATGCTTCAACC 9143
Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370
|| | ||||| ||||| || |||||||||||||| ||||| ||||||
Sbjct 9142 TCTAATGTTATGGTTTTCCCTGTAAGAGTTTTTACAAAAATCTGCATG 9095
Score = 98.7 bits (108), Expect = 6e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| |||| |||| | ||||| |||||| || |||||||| || |||||||| |||||
Sbjct 10006 CCACCTCGCAACCTTAGCACCAGATGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAT 9947
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
| | || || || | ||||| ||| ||| || | |||||||||||| | ||
Sbjct 9946 AGGGTCCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCTGGAGGA 9887
Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322
|| |||||||| || ||| | ||| || ||| || ||||| | || ||
Sbjct 9886 ATACCTTCTTTATCCTGGATCTTCGCTTTCACATTTTCGATGGTGTCTGAAGCTTCCACT 9827
Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||||| || || |||||||| ||||| || || || || || |||||
Sbjct 9826 TCCAGGGTAATGGTTTTTCCAGTAAGTGTCTTCACAAAGATCTGCAT 9780
Score = 87.8 bits (96), Expect = 1e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 33154 CCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTG 33213
|| || ||| |||||||| || || || || || || ||||||||||| || | |
Sbjct 10679 CCTCAGCACTAAATGCAAAGTGGATTCCTTCTGAATGTTGTAATCAGATAAGGTCCTTCC 10620
Query 33214 GTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT 33273
|| || | ||||| ||| ||| || | ||| || ||||| | || |||||||||||
Sbjct 10619 ATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGAGGGATGCCTTCTTT 10560
Query 33274 TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTAT 33333
|| |||| ||| || ||| ||| ||||| | | ||| |||| || ||
Sbjct 10559 ATCTTGAATCTTAGCTTTCACATTTTCAATTGTGTCAGATGCCTCAACTTCCAATGTAAT 10500
Query 33334 CGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||||| || ||||| || || || |||||||||||
Sbjct 10499 TGTTTTGCCAGTAAGTGTCTTCACAAAAATTTGCAT 10464
>seq302910
Length=12142
Score = 105 bits (116), Expect = 4e-18
Identities = 152/213 (71%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220
|||||||| ||||| |||||||| || |||||||| ||||| ||| | | || |||
Sbjct 3984 ACCAAATGTAATGTGGACTCTTTCTGAATATTGTAGTCAGATAAAGTACGCCCATCTTCC 4043
Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---G 33277
||||| |||||| ||| || | | |||||||| | || || |||||||| || |
Sbjct 4044 AATTGTTTTCCAGCAAAAATAAGCCTCTGCTGGTCTGGTGGAATTCCTTCTTTGTCTTGG 4103
Query 33278 CTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337
| | |||| | || ||| ||| || || |||| ||| ||||| ||||| |||
Sbjct 4104 ATTTTGGCCT---TCACATTTTCAATAGTATCTGATGGTTCAACTTCCAGTGTTATTGTT 4160
Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370
|| || || | || || || ||||||||||||
Sbjct 4161 TTACCTGTTAATGTCTTGACAAAAATTTGCATG 4193
Score = 93.3 bits (102), Expect = 3e-14
Identities = 139/195 (71%), Gaps = 8/195 (4%)
Strand=Plus/Plus
Query 33180 CTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTC-ATCC---AATTGCTTTCCACTA 33235
|||||||||| |||||||| || | ||||| || |||| | ||| || ||| |
Sbjct 11150 CTTTTTGTATGTTGTAATCTGAGA----GAGTTCTTCCATCCTCAAGTTGTTTACCAGCA 11205
Query 33236 AATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACT 33295
|| ||||| || || || || | ||||| |||||||| || ||| ||||||
Sbjct 11206 AAGATTAATCGCTGTTGATCTGGCGGTATTCCTTCTTTGTCTTGAATTTTTGCTTTTACA 11265
Query 33296 GTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTT 33355
||| ||| ||||| || | ||| |||| ||||| ||||| || || |||||||||
Sbjct 11266 TTTTCAATTGTGTCTGATGGCTCAACTTCCAATGTTATTGTTTTCCCTGTCAGAGTTTTT 11325
Query 33356 ACGAAAATTTGCATG 33370
|| ||||| ||||||
Sbjct 11326 ACAAAAATCTGCATG 11340
>seq238538
Length=16363
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 33182 TTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATT 33241
||||| || ||||||||||| | | | | || ||||| ||||| ||| ||| ||
Sbjct 10523 TTTTGAATGTTGTAATCAGAAAGAGTCCTTCCATCTTCCAACTGCTTGCCAGCAAAGATC 10582
Query 33242 AAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGA 33301
|| | |||||||| | || || ||||| || || |||| | || || ||| |
Sbjct 10583 AATCTCTGCTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTTCGCCTTCACATTTTCA 10642
Query 33302 ATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAA 33361
|| ||||| || || || || | ||| || ||||| |||||||| || || ||||||
Sbjct 10643 ATTGTGTCTGAGGCTTCTACCTCTAAAGTAATGGTTTTCCCCGTAAGGGTCTTCACGAAA 10702
Query 33362 ATTTGCATGTT 33372
|||||||| ||
Sbjct 10703 ATTTGCATCTT 10713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 313348201035816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |