Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_005262.3 Length=63882 Score E Sequences producing significant alignments: (Bits) Value seq516988 152 2e-32 >seq516988 Length=1185 Score = 152 bits (168), Expect = 2e-32 Identities = 188/255 (74%), Gaps = 4/255 (2%) Strand=Plus/Minus Query 10231 TCCGTCTCGCGACGACCGATCGATACAAGGACAAGGCGAGCGGCGACATCAAGGAGGCGA 10290 |||| | || || ||||| || |||||||||||||||||||| || || ||||| || | Sbjct 1185 TCCGCGTGGCCACCACCGACCGCTACAAGGACAAGGCGAGCGGAGAAATGAAGGAAGCCA 1126 Query 10291 CTGAATGGCACCGCGTCTCGTTCTTCGGTCGGCTGGCTGAGATCGTCGACGAGCACCTGC 10350 | || ||||||||| || | |||||||| || |||| || || | || ||| ||||| Sbjct 1125 CGGAGTGGCACCGCATCGCCTTCTTCGGCCGCTTGGCAGAAATTGCCGGCGAATACCTGA 1066 Query 10351 GCAAGGGCGCATCTGTCTACATCGAGGGGCGCATCAAGACGCGGAAGTGGCAGGATCAAT 10410 ||||| | || |||||||||||||| | ||||| || ||||| || | | Sbjct 1065 AGAAGGGTTCGTCGGTCTACATCGAGGGCAAGCTGAAGACTCGCCAGTGGGAGAAGGA-- 1008 Query 10411 CCGGCCAGGATCGTTACACGACCGAGATCGTCGCTGACCGCATGCAGATGCTCGGCAAGC 10470 |||||| | | |||| |||||||||||||| |||| ||||||||||| || | || Sbjct 1007 -TGGCCAGAAACAGTACAGCACCGAGATCGTCGCAGACCAGATGCAGATGCT-GGGAGGC 950 Query 10471 CGGGCGGAAGCCGCG 10485 | |||||| |||| Sbjct 949 AAGCCGGAAGGCGCG 935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200818016811516