Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq741633 96.9 3e-15
seq1341392 82.4 6e-11
>seq741633
Length=11487
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
|||||| |||||||| ||||| | ||| || || ||||| ||||| ||||||||||
Sbjct 8867 ACCTCCTCGCAACCTCAACACCAGATGGAGAGTCGATTCCTTCTGAATATTGTAATCAGA 8808
Query 48559 CA-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617
|| | || || | || |||||||||||||| | |||| | ||| ||||| || |
Sbjct 8807 CAGAGTGCGGC-CATCTTCCAGCTGCTTACCAGCAAAAATGAGACGTTGCTGGTCTGGTG 8749
Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677
| | | ||| |||||| || || ||| | | | || || || | || |||
Sbjct 8748 GAATTCCTTCTTTGTCCTGGATCTTTGCCTTCACATTTTCAATTGTGTCTGAAGCTTCCA 8689
Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
|| | ||| ||||| || || ||||| || || |||||||||||||||
Sbjct 8688 CTTCCAGTGTGATGGTCTTGCCTGTGAGGGTCTTTACAAAAATCTGCATC 8639
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || |||| ||| | ||| | ||| | ||| ||||| |||||||||||||| |
Sbjct 10919 ACCACCACGCAGCCTCAGCACCAGATGCAAAGTGGATTCCTTCTGAATGTTGTAATCTGA 10860
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| ||| | || ||||||||||| || || | || | ||| ||||| || ||
Sbjct 10859 CAGGGTTCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCTGGTGG 10800
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| || ||| ||||| || || ||| | | | | ||||| || | || ||||
Sbjct 10799 AATACCTTCTTTGTCTTGTATCTTTGCCTTCACATTCTCAATGGTGTCTGAAGCCTCCAC 10740
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | ||| || || || || || || || |||||||||||||||||
Sbjct 10739 TTCCAATGTAATTGTCTTGCCTGTAAGTGTCTTCACAAAAATCTGCAT 10692
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| | || ||| | || | |||||||| ||| || |||||||||||||| | |
Sbjct 9094 CCTCCCCTCAGCCTAAGAACCAGGTGAAGTGTAGACTCTTTCTGAATGTTGTAATCTGAC 9035
Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619
|| || | || || ||||| || || | |||| || | ||| || || ||
Sbjct 9034 AAAGTGCGGCCATCTTCAAGCTGTTTTCCTGCAAAAATCAATCTCTGTTGGTCTGGTGGT 8975
Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679
| || |||||||||| || || ||| | | ||||||| || | | ||||
Sbjct 8974 ATACCTTCCTTGTCCTGGATCTTTGCCTTCACGTTCTCTATGGTGTCTGATGCCTCCACT 8915
Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|||| |||||| ||||| || || ||||| || ||||| ||||||||
Sbjct 8914 TCGAGTGTTATAGTTTTGCCAGTCAGAGTCTTTACAAAGATCTGCAT 8868
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
|| ||||||||||||| ||| | ||| || || ||||| |||||||||||||| | |
Sbjct 11146 CCACCGCGCAACCTTAGCACCAGATGCAGAGTAGATTCCTTCTGAATGTTGTAATCTGAC 11087
Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619
| || | || || |||||||| || | | || | ||| |||||||| ||
Sbjct 11086 AGGGTGCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCTGGAGGA 11027
Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679
| | ||| |||||| || ||| ||| | | | | ||||| || | | ||||
Sbjct 11026 ATCCCTTCTTTGTCCTGGATCTTCGCCTTCACATTCTCAATGGTGTCCGACGCCTCCACT 10967
Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | || |||||||| || || || || ||||| || ||||||||
Sbjct 10966 TCCAAGGTAATGGTTTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 10920
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || |||||||| | || | ||| || || ||||| ||||| || |||||||
Sbjct 10235 ACCACCACGCAACCTCAGGACAAGATGCAGAGTAGATTCCTTCTGAATATTATAATCAGA 10176
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| ||| | || ||||||||||| || | | || || | |||||| || |||
Sbjct 10175 CAAGGTCCGCCCATCTTCCAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGCGG 10116
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | ||| || ||| || ||| || | | | |||||||||||| | ||
Sbjct 10115 AATGCCTTCTTTATCCTGGATCTTCGCTTTTACATTCTCTATGGTATCGGATGCTTCTAC 10056
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | ||| || ||||| || || | ||||||||||| ||||||||
Sbjct 10055 TTCTAATGTAATAGTTTTTCCAGTCAAGGTTTTCACAAATATCTGCAT 10008
>seq1341392
Length=603
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || | ||| |||| || ||||| || || ||||| ||||||||||||||||
Sbjct 508 ACCACCTCTCAATCTTAGTACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGA 449
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| | || | || || || ||||| || || | || | | ||| ||||| ||
Sbjct 448 CAGTGTACGACCATCTTCGAGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGATCTGGTGG 389
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | |||||| ||| ||| ||| ||||| | |||| || || | || || |
Sbjct 388 AATGCCTTCCTTATCCTGAATCTTCGCCTTGACATTTTCTATAGTGTCTG-AGGCTTCAA 330
Query 48679 C-TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| || | ||||||||| || || ||||| || || ||||| ||||||||
Sbjct 329 CTTCCAATGTTATGGTCTTGCCTGTGAGGGTCTTTACAAATATCTGCAT 281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414076477469492
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |