Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq24571 86.0 3e-12 >seq24571 Length=22582 Score = 86.0 bits (94), Expect = 3e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 3611 GGATCAAATGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAA 3670 ||| || |||| ||| | ||||||||||| || || |||||||| || |||||| ||| Sbjct 17816 GGACCACATGACTTGCTTTATTTTGCTGATGTCTGTGCTGGTCCTGGAGGTTTCTCCGAA 17875 Query 3671 TATATGTTATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTT 3720 ||| | || |||||||| || ||| | |||||||| |||| | ||||| Sbjct 17876 TATGTATTGTGGAGAAAAAAGTGGCAAGCCAAAGGTTTTGGTTTCACGTT 17925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 271843357406476