Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq451703 111 8e-20
seq776066 104 1e-17
seq481049 104 1e-17
seq848923 102 4e-17
seq1116363 100 1e-16
seq904752 100 1e-16
seq165507 100 1e-16
seq607487 98.7 5e-16
seq481121 98.7 5e-16
seq481104 98.7 5e-16
seq451690 98.7 5e-16
seq253212 98.7 5e-16
seq169109 96.9 2e-15
seq607485 93.3 2e-14
seq582877 93.3 2e-14
seq992382 91.5 8e-14
seq257231 89.7 3e-13
seq767502 86.0 3e-12
seq327626 84.2 1e-11
>seq451703
Length=6803
Score = 111 bits (122), Expect = 8e-20
Identities = 88/105 (84%), Gaps = 5/105 (5%)
Strand=Plus/Plus
Query 11430 AATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGC 11489
||||| |||| | |||||| |||||||| || |||||||||| ||||||||||
Sbjct 4787 AATATCGAAT--AGAAAAAAC---ATTGGCCCGTGGGGGGATCGAACCCACGACCTTCGC 4841
Query 11490 GTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGTCGA 11534
||||||||||||| ||||| |||||||||||||| ||||||||||
Sbjct 4842 GTTATTAGCACGAGGCTCTAACCAACTGAGCTAACGGGCCGTCGA 4886
>seq776066
Length=1956
Score = 104 bits (114), Expect = 1e-17
Identities = 78/91 (86%), Gaps = 1/91 (1%)
Strand=Plus/Plus
Query 11440 TAATA-AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498
||||| |||||| | |||||| || | |||||||||| |||||||||||||||||||
Sbjct 1458 TAATAGAAAAATTACCGTGGCCCGTGGAGGGATCGAACCCACGACCTTCGCGTTATTAGC 1517
Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||| ||||| |||||||||||||| |||||
Sbjct 1518 ACGAGGCTCTAACCAACTGAGCTAACGGGCC 1548
>seq481049
Length=9678
Score = 104 bits (114), Expect = 1e-17
Identities = 74/85 (87%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504
|||||| ||||||||| || |||||||||| ||||||||||||||||||||||||
Sbjct 3590 AAAAAT--AATTGGCCCGTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACA 3647
Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529
|||| |||||||||||||| |||||
Sbjct 3648 CTCTAACCAACTGAGCTAACGGGCC 3672
>seq848923
Length=14670
Score = 102 bits (112), Expect = 4e-17
Identities = 69/78 (88%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511
|||||||||| || |||||||||| |||||||||||||||||||||||| |||| ||
Sbjct 10445 AAATTGGCCCGTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACACTCTAAC 10504
Query 11512 CAACTGAGCTAATGGGCC 11529
|||||||||||| |||||
Sbjct 10505 CAACTGAGCTAACGGGCC 10522
>seq1116363
Length=5213
Score = 100 bits (110), Expect = 1e-16
Identities = 77/91 (85%), Gaps = 1/91 (1%)
Strand=Plus/Minus
Query 11440 TAATA-AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498
||||| |||||| | |||||| || |||||||||| |||||||||||||||||||
Sbjct 456 TAATAGAAAAATTACCGTGGCCCGTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGC 397
Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||| ||||| |||||||||||||| |||||
Sbjct 396 ACGAGGCTCTAACCAACTGAGCTAACGGGCC 366
>seq904752
Length=8992
Score = 100 bits (110), Expect = 1e-16
Identities = 78/92 (85%), Gaps = 4/92 (4%)
Strand=Plus/Plus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
||||||| | |||||| || |||||||||| ||||||||||||||||||| ||||
Sbjct 6254 AAAAAATAA---TGGCCCGTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCTCGAC 6310
Query 11504 GCTCTRACCAACTGAGCTAATGGGCC-GTCGA 11534
||||| |||||||||||||| ||||| |||||
Sbjct 6311 GCTCTAACCAACTGAGCTAACGGGCCGGTCGA 6342
>seq165507
Length=1205
Score = 100 bits (110), Expect = 1e-16
Identities = 77/91 (85%), Gaps = 1/91 (1%)
Strand=Plus/Minus
Query 11440 TAATA-AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498
||||| |||||| | | |||||| || ||| |||||| |||||||||||||||||||
Sbjct 362 TAATAGAAAAATAACAGTGGCCCGTGGGGGGACCGAACCCACGACCTTCGCGTTATTAGC 303
Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||| |||||||||||||| |||||
Sbjct 302 TCGACGCTCTAACCAACTGAGCTAACGGGCC 272
>seq607487
Length=5600
Score = 98.7 bits (108), Expect = 5e-16
Identities = 67/76 (88%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513
|||||||| || |||||||||| ||||||||||||||||||||||||||| | ||||
Sbjct 1782 ATTGGCCCGTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTGTAACCA 1841
Query 11514 ACTGAGCTAATGGGCC 11529
|||||||||| |||||
Sbjct 1842 ACTGAGCTAACGGGCC 1857
>seq481121
Length=40320
Score = 98.7 bits (108), Expect = 5e-16
Identities = 67/76 (88%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513
|||||||| || |||||||||| |||||||||||||||||||||| |||||| ||||
Sbjct 10717 ATTGGCCCGTGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGCCGCTCTAACCA 10658
Query 11514 ACTGAGCTAATGGGCC 11529
|||||||||| |||||
Sbjct 10657 ACTGAGCTAACGGGCC 10642
>seq481104
Length=4503
Score = 98.7 bits (108), Expect = 5e-16
Identities = 67/76 (88%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513
|||||||| || |||||||||| |||||||||||||||||||||||| |||| ||||
Sbjct 626 ATTGGCCCGTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACTCTCTAACCA 685
Query 11514 ACTGAGCTAATGGGCC 11529
|||||||||| |||||
Sbjct 686 ACTGAGCTAACGGGCC 701
>seq451690
Length=8642
Score = 98.7 bits (108), Expect = 5e-16
Identities = 67/76 (88%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513
|||||||| || |||||||||| |||||||||||||||||||||| |||||| ||||
Sbjct 1995 ATTGGCCCGTGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGCCGCTCTAACCA 1936
Query 11514 ACTGAGCTAATGGGCC 11529
|||||||||| |||||
Sbjct 1935 ACTGAGCTAACGGGCC 1920
>seq253212
Length=565
Score = 98.7 bits (108), Expect = 5e-16
Identities = 67/76 (88%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513
|||||||| || |||||||||| ||||||||||||||||||||||||||| | ||||
Sbjct 322 ATTGGCCCGTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTGTAACCA 381
Query 11514 ACTGAGCTAATGGGCC 11529
|||||||||| |||||
Sbjct 382 ACTGAGCTAACGGGCC 397
>seq169109
Length=10834
Score = 96.9 bits (106), Expect = 2e-15
Identities = 58/62 (94%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 5477 GGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACGGG 5418
Query 11528 CC 11529
||
Sbjct 5417 CC 5416
>seq607485
Length=4721
Score = 93.3 bits (102), Expect = 2e-14
Identities = 72/86 (84%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 11438 ATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497
||| ||||||| |||||||| || |||||||||| ||||||||||||||||||
Sbjct 1536 ATTCATAAAAAC----ATTGGCCCGTGGGGGGATCGAACCCACGACCTTCGCGTTATTAG 1591
Query 11498 CACGACGCTCTRACCAACTGAGCTAA 11523
||||||||| | ||||||||||||||
Sbjct 1592 CACGACGCTGTAACCAACTGAGCTAA 1617
>seq582877
Length=11038
Score = 93.3 bits (102), Expect = 2e-14
Identities = 68/80 (85%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513
|||||||| || ||| |||||| ||||||||||| ||||||||||| ||||| ||||
Sbjct 4028 ATTGGCCCGTGGGGGGAACGAACCCCCGACCTTCGCGCTATTAGCACGATGCTCTAACCA 3969
Query 11514 ACTGAGCTAATGGGCCGTCG 11533
|||||||||| |||||| ||
Sbjct 3968 ACTGAGCTAACGGGCCGACG 3949
>seq992382
Length=1913
Score = 91.5 bits (100), Expect = 8e-14
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||| || |||||||||| |||||||||| ||||||||||| |||||| ||||||
Sbjct 882 TGGCCCGTGGGGGGATCGAACCCACGACCTTCGCATTATTAGCACGCCGCTCTAACCAAC 941
Query 11516 TGAGCTAATGGGCC 11529
|||||||| |||||
Sbjct 942 TGAGCTAACGGGCC 955
>seq257231
Length=2546
Score = 89.7 bits (98), Expect = 3e-13
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513
|||||||| || ||||| |||| ||||||||||||||||||||||||||||| ||||
Sbjct 758 ATTGGCCCGTGGGGGGATCAAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCA 817
Query 11514 ACTGAGCTAATGGGCC 11529
|||| ||||| | |||
Sbjct 818 ACTGCGCTAACGTGCC 833
>seq767502
Length=9263
Score = 86.0 bits (94), Expect = 3e-12
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||||||||||||||| | |||||| |||||||||||||| |||
Sbjct 1390 GGATCGAACCCGCGACCTTCGCGTTATTAGCGCTCCGCTCTAACCAACTGAGCTAACGGG 1331
Query 11528 CC-GTCGACGA 11537
|| | ||||||
Sbjct 1330 CCAGACGACGA 1320
>seq327626
Length=2764
Score = 84.2 bits (92), Expect = 1e-11
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513
|||||||| || |||||||||| |||||||||||||||||||||||||| || |||
Sbjct 706 ATTGGCCCGTGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCGCTATCCA 765
Query 11514 ACTGAGCTAA 11523
|||||| |||
Sbjct 766 ACTGAGTTAA 775
Lambda K H
0.638 0.409 0.920
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 257037499205392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |