Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq516988 93.3 2e-14 >seq516988 Length=1185 Score = 93.3 bits (102), Expect = 2e-14 Identities = 141/200 (71%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 11206 CTCGGTGCTGTAGTGGTCCTGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAGGCTGCC 11265 |||||||||||| || | |||||| |||| || ||||| ||| || || |||| Sbjct 983 CTCGGTGCTGTACTGTTTCTGGCCATCCTT---CTCCCACTGGCGAGTCTTCAGCTTGCC 1039 Query 11266 TTCGATGTAGACCTGGGAGCCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCGGCC 11325 |||||||||||| || ||||| |||||||| | || ||||| |||| ||||| Sbjct 1040 CTCGATGTAGACCGACGAACCCTTCTTCAGGTATTCGCCGGCAATTTCTGCCAAGCGGCC 1099 Query 11326 AAAGAGCACGACCCGGTGCCACTCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTCTTT 11385 |||| ||| ||||||||||| ||| |||| | | ||| || |||||| || Sbjct 1100 GAAGAAGGCGATGCGGTGCCACTCCGTGGCTTCCTTCATTTCTCCGCTCGCCTTGTCCTT 1159 Query 11386 CCAGCTTTCGCTAGTGGCCA 11405 ||| ||| | ||||||| Sbjct 1160 GTAGCGGTCGGTGGTGGCCA 1179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 204948055438672