Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq599987 123 3e-23
seq791531 95.1 1e-14
seq599989 82.4 9e-11
>seq599987
Length=38784
Score = 123 bits (136), Expect = 3e-23
Identities = 136/179 (76%), Gaps = 4/179 (2%)
Strand=Plus/Plus
Query 62336 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62395
||| ||||||||||||||||| || | || || || ||||| |||||||| ||||| |
Sbjct 15435 TACCTGAAATTCTCCAGACAAAACGCGGCGTGTATATATATTGCTGGTATATGGTTCAAA 15494
Query 62396 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62455
|||||||| ||||| | ||||| ||||| |||||||| ||||| ||||||| ||| |
Sbjct 15495 GGACTCATTGTTTCCAAGTATTTGGGCAGTCGATGCAGTTGGCATTGGTGCCAACAAGAG 15554
Query 62456 ACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAG 62512
| || | || ||| ||| | | ||||| ||||| |||| |||||| ||||||
Sbjct 15555 AGAGTTGCGAACACC--ATGAACAGCAATTTTTTCTTTGAGAGCAGCCCAATCCCAAAG 15611
Score = 111 bits (122), Expect = 2e-19
Identities = 142/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 62570 TCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGC 62629
|||| |||| || ||||| || || ||| ||||||||||| || || ||||| ||
Sbjct 16297 TCCTTCATAAGTCTCGTAAGGACCCAAAGCCTCTGCTAGTTCACAGCTTGCTTCTAAAGC 16356
Query 62630 ACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAA 62689
|| || || || ||||| || |||| |||||| | |||||| || || |||||
Sbjct 16357 TCCATAGTAGATTGTTTCAAATATCTGGATATTTAACTTTTGTGCCTCTTCACTCTCAAA 16416
Query 62690 TGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCT 62749
|||||| | | ||||||||||| || || | ||||||||||| ||||| ||||| |
Sbjct 16417 TGGATACCTCATAAGAATAAACGCATCGGCAAGGCCTTGAACACCGATACCAATAGGACG 16476
Query 62750 ATGTCTCTTATTAGAG 62765
||| | | | || |||
Sbjct 16477 ATGCCGCATGTTTGAG 16492
Score = 107 bits (118), Expect = 2e-18
Identities = 112/147 (76%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 62063 CCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATT 62122
|||| | ||||||||||| ||||| || |||| | || || || ||||| || ||
Sbjct 2112 CCATGCATAAAAATGCATTGATGTTAGCTTTCCATAATTTGGCTCAGCAATATGTATGTT 2171
Query 62123 CATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTT 62182
| ||| ||||| ||||| ||||| ||||| || || || |||||||| || || || ||
Sbjct 2172 GAGAGACTGACTCTGATCAATGAAAGCTCCTCTATCAGCTGCCATTTTGATAATTGTTTT 2231
Query 62183 TTGTGGAATTTCCCAAATAGTTTTATA 62209
|| ||||||||||| | |||||||||
Sbjct 2232 CTGAGGAATTTCCCACACAGTTTTATA 2258
>seq791531
Length=8839
Score = 95.1 bits (104), Expect = 1e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 33790 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTC 33849
|| |||| |||||||||||| | ||||| || || || ||||| ||||||||||| |
Sbjct 6576 TTCGATAAATCTACTTCTTCAGCCGTCCAGAAAGACGCTTCTGCTTTTTTATACATAGCC 6517
Query 33850 CAGATGTCATAATATTGGATTGGGAAAATAACAAATCTATTTGGATT 33896
|| || |||| ||| || ||||||||||| |||||||| |||| ||
Sbjct 6516 CAAATATCATGATACTGAATTGGGAAAATGACAAATCTTCTTGGGTT 6470
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623
||| |||| || ||||| || | |||||||||||| || ||||| | || || || ||
Sbjct 7007 ATCCTTAATGTATGTATCAATGAGAAGACTATACATCTCAGAATGCACATTCTCCATAGC 6948
Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33683
|| || || || ||||||||||| || || || | || |||||| || || | |||
Sbjct 6947 AATTTGGAAGCCATAGAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTGAACCTTTC 6888
Query 33684 CGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 33743
||| ||||| || || || || ||||| || || || || || | ||||| ||
Sbjct 6887 AACCAGGTTTTCGTTAACAATGCCATCACTAGCAGCGAAGAAAGCTAGAACATGGGAAAT 6828
Query 33744 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAAT 33778
|||| |||| || ||| |||| | | |||||
Sbjct 6827 GAAATGCCTTTCTTCAGGTTTTAGCTGCTGCCAAT 6793
>seq599989
Length=4882
Score = 82.4 bits (90), Expect = 9e-11
Identities = 105/142 (74%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 63611 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670
|||||| || ||| | |||||||||||| || || || || ||||||| | |||||
Sbjct 4426 AGTTCCAGCTCCAAAGAGGGTAGGAGAAGCATGAGTGAAGTATCTTTCAGATAACAGATT 4485
Query 63671 GTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTA 63729
|| |||| ||||| | ||||| ||| || | || || || || || |||||||| |
Sbjct 4486 ATATGTCTGTATAGCAGCATCTATGTCCTCACCG-TGTATGCCAACAGCTACACGCATCA 4544
Query 63730 ACATGTGCTGAGGTCTTTCAAC 63751
|||| || ||||| | ||||||
Sbjct 4545 ACATATGTTGAGGCCGTTCAAC 4566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 612065153394720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |