Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq741633 102 8e-17 seq1341392 87.8 2e-12 seq302910 86.0 6e-12 >seq741633 Length=11487 Score = 102 bits (112), Expect = 8e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | ||||| || | |||||| | ||| |||| || Sbjct 7899 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACAATCACCCTTGAAGTAGAGGCATCA 7958 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | |||||| |||||| || || ||||| || || || || ||| Sbjct 7959 GACACCATTGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGTATTCCACCAGACCAA 8018 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG-AAAC-GTCAGCGACTATA 26946 || || || || | || || || ||||||||||||| | | | || ||| || || | Sbjct 8019 CAGAGGCTGATCTTCGCAGGGAAGCAACTCGAAGATGGTCGTACACTGTC--TGATTACA 8076 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||| || |||||||| ||||| |||| || ||| | ||||| || Sbjct 8077 ACATTCAGAAGGAATCTACCCTCCATTTGGTACTAAGATTGAGAGGTGG 8125 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | ||||||||| | || ||| | ||| | || | Sbjct 10920 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAAACCATTACCTTGGAAGTGGAGGCGTCG 10979 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| ||| | || || ||||| |||||||||||||| ||||| ||||| Sbjct 10980 GACACCATTGAGAATGTGAAGGCGAAGATCCAGGACAAAGAAGGGATTCCTCCAGATCAG 11039 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGACTATA 26946 ||| | ||||| | | ||||| || || ||||||| | | | |||| || || | Sbjct 11040 CAACGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGACGCACCCTGTCA--GATTACA 11097 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAG 26983 ||||||| || ||||||||| | |||||||| || || Sbjct 11098 ACATTCAGAAGGAATCTACTCTGCATCTGGTGCTAAG 11134 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || ||| ||||||| ||| | ||||| | ||| |||| || Sbjct 8127 ATGCAGATATTCGTTAAGACACTAACTGGTAAAACCATCACATTGGAAGTAGAGGCATCT 8186 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || ||| | || || || ||| || || |||||||| || || ||||| Sbjct 8187 GATACAATTGAGAATGTGAAGGCGAAAATTCAGGATAAGGAAGGGATCCCACCTGATCAG 8246 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||||| |||| | ||||||||||||||||||| |||| | || || || Sbjct 8247 CAGAGACTGATTTTTGCTGGCAAACAACTCGAAGATGGGAGAACTCTATCTGATTACAAT 8306 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAG 26983 ||||| || |||||||| | || ||||| |||| Sbjct 8307 ATTCAGAAGGAATCTACCCTGCACCTGGTATTGAG 8341 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || ||| | ||||||||| | || ||| | ||| | ||| | Sbjct 9780 ATGCAGATCTTTGTGAAGACACTTACTGGAAAAACCATTACCCTGGAAGTGGAAGCTTCA 9839 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || ||| ||||| || |||||||| || ||||| || || Sbjct 9840 GACACCATCGAAAATGTGAAAGCGAAGATCCAGGATAAAGAAGGTATTCCTCCAGACCAG 9899 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||| | | ||||| || || ||||||| | | | | ||||| || Sbjct 9900 CAACGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGACGGACCCTATCTGACTACAAT 9959 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAG 26983 ||||| ||||| || ||| | |||||||| || || Sbjct 9960 ATTCAGAAAGAGTCCACTTTGCATCTGGTGCTAAG 9994 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||||||||| | || || ||| | || || | || | ||| || Sbjct 9096 ATGCAGATTTTTGTAAAAACTCTTACAGGGAAAACCATAACATTAGAGGTTGAAGCATCT 9155 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || ||| | || ||| ||| ||| || || ||||| || || || || || Sbjct 9156 GACACTATTGAGAATGTAAAAGCAAAAATTCAAGATAAGGAAGGCATCCCACCTGACCAG 9215 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||| | |||| | ||||||||||| || |||| | | | ||||| || Sbjct 9216 CAGAGATTGATTTTTGCTGGCAAACAACTTGAGGATGGCCGCACTCTTTCAGACTACAAT 9275 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || ||||||||||| | ||| |||| ||||| || |||||||| Sbjct 9276 ATCCAGAAAGAATCTACACTACATTTGGTGCTGAGGCTCAGAGGAGG 9322 Score = 89.7 bits (98), Expect = 5e-13 Identities = 117/160 (73%), Gaps = 4/160 (3%) Strand=Plus/Plus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| ||| | || || |||||| ||||||||||| || || || || || Sbjct 10752 GACACCATTGAGAATGTGAAGGCAAAGATACAAGACAAAGAAGGTATTCCACCAGACCAG 10811 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGACTATA 26946 ||| | ||||| | || ||||| || || ||||||| ||| | |||| || || | Sbjct 10812 CAACGTCTCATCTTCGCTGGCAAGCAGCTGGAAGATGGACGAACCCTGTCA--GATTACA 10869 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACT 26986 ||||||| || ||||| ||| | |||||||| ||||| || Sbjct 10870 ACATTCAGAAGGAATCCACTTTGCATCTGGTGCTGAGGCT 10909 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/136 (75%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921 || || |||||||| || || ||||| || ||||| || | | || || ||| | ||| Sbjct 8505 GATAAGGAAGGGATCCCACCTGATCAGCAGAGACTTATATTTGCAGGAAAGCAATTAGAA 8564 Query 26922 GATGATAGAAAC--GTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCC 26979 |||| | | ||||| |||||||||||||||| ||||||||| | || || || | Sbjct 8565 GATGGCCGTACTTTGTCAG--ACTATAACATTCAAAAGGAATCTACTCTTCACCTTGTGC 8622 Query 26980 TGAGACTTAGAGGAGG 26995 | |||||||||||||| Sbjct 8623 TCAGACTTAGAGGAGG 8638 >seq1341392 Length=603 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | |||||||| || | || || || | || || | ||| | ||| | Sbjct 281 ATGCAGATATTTGTAAAGACCCTCACAGGCAAGACCATAACATTGGAAGTTGAAGCCTCA 340 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | ||||| |||||| || || ||||| || || || |||||| Sbjct 341 GACACTATAGAAAATGTCAAGGCGAAGATTCAGGATAAGGAAGGCATTCCACCAGATCAA 400 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG-AAAC-GTCAGCGACTATA 26946 || || || || | || || || ||||||||||||| | | | || ||| || || | Sbjct 401 CAGAGGCTGATCTTCGCAGGGAAGCAACTCGAAGATGGTCGTACACTGTC--TGATTACA 458 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||| || |||||||| ||||| |||| || ||| | ||||| || Sbjct 459 ACATTCAGAAGGAATCTACCCTCCATTTGGTACTAAGATTGAGAGGTGG 507 >seq302910 Length=12142 Score = 86.0 bits (94), Expect = 6e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| ||||| | ||||| ||| | || || | ||| | ||| || Sbjct 4509 ATGCAAATTTTTGTGAAAACTCTCACTGGTAAAACAATAACTCTGGAAGTGGAACCATCA 4450 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | || || ||| || || ||||||||||| || || |||||| Sbjct 4449 GATACCATAGAAAATGTTAAGGCAAAAATCCAGGATAAAGAAGGGATCCCACCTGATCAA 4390 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || ||||| | || || |||||||| ||||||| | | | | || || || || Sbjct 4389 CAGAGGCTCATCTTCGCAGGGAAACAACTAGAAGATGGTCGTACCCTCTCAGATTACAAT 4330 Query 26949 ATTCAAAAAG 26958 || ||||||| Sbjct 4329 ATCCAAAAAG 4320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470300814066240