Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1341392 120 3e-22 seq741633 120 3e-22 seq302910 89.7 4e-13 seq708045 87.8 2e-12 seq302911 86.0 5e-12 >seq1341392 Length=603 Score = 120 bits (132), Expect = 3e-22 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | |||||||| || | || || || | || || | ||||| || ||| Sbjct 281 ATGCAGATATTTGTAAAGACCCTCACAGGCAAGACCATAACATTGGAAGTTGAAGCCTCA 340 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| |||||| || || |||||||| || || |||||| Sbjct 341 GACACTATAGAAAATGTCAAGGCGAAGATTCAGGATAAGGAAGGCATTCCACCAGATCAA 400 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATTATA 24168 ||||| ||||| | || || ||||||||||||||| | | | || ||| ||||| | Sbjct 401 CAGAGGCTGATCTTCGCAGGGAAGCAACTCGAAGATGGTCGTACACTGTC--TGATTACA 458 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||| || |||||||| | ||||| || ||||||||||||| || Sbjct 459 ACATTCAGAAGGAATCTACCCTCCATTTGGTACTAAGATTGAGAGGTGG 507 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||| || | || ||| | ||||| ||||| Sbjct 53 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACAATCACCCTTGAAGTAGAGGCATCA 112 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | |||||| |||||| || || ||||| || || || || ||| Sbjct 113 GACACCATTGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGTATTCCACCAGACCAA 172 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | || ||||| || ||||||| | | | | || || || Sbjct 173 CAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACATTGTCTGACTACAAT 232 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| || || || |||| | || | ||||||||||| || Sbjct 233 ATTCAAAAGGAGTCCACCCTTCACCTTGTCCTTAGATTGAGAGGTGG 279 >seq741633 Length=11487 Score = 120 bits (132), Expect = 3e-22 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||| || | || ||| | ||||| ||||| Sbjct 7899 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACAATCACCCTTGAAGTAGAGGCATCA 7958 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | |||||| |||||| || || ||||| || || || || ||| Sbjct 7959 GACACCATTGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGTATTCCACCAGACCAA 8018 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATTATA 24168 ||||| ||||| | || || ||||||||||||||| | | | || ||| ||||| | Sbjct 8019 CAGAGGCTGATCTTCGCAGGGAAGCAACTCGAAGATGGTCGTACACTGTC--TGATTACA 8076 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||| || |||||||| | ||||| || ||||||||||||| || Sbjct 8077 ACATTCAGAAGGAATCTACCCTCCATTTGGTACTAAGATTGAGAGGTGG 8125 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| || ||| | ||||| ||| | ||||| | ||||| ||||| Sbjct 10463 AATGCAAATTTTTGTGAAGACACTTACTGGCAAAACAATTACATTGGAAGTTGAGGCATC 10522 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | || ||| |||||| || ||||||||||| ||||| || || Sbjct 10523 TGACACAATTGAAAATGTGAAAGCTAAGATTCAAGATAAAGAAGGCATCCCTCCAGACCA 10582 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||| | || || | | |||||||| || ||||||| || | | | ||||| || Sbjct 10583 ACAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGAAGGACCTTATCTGATTACAA 10642 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||| || ||||| || | ||||||||| | || || | ||||| Sbjct 10643 CATTCAGAAGGAATCCACTTTGCATTTAGTGCTGAGGCTGCGTGGAGG 10690 Score = 105 bits (116), Expect = 6e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||||||| | |||||| | ||||| ||||| Sbjct 10920 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAAACCATTACCTTGGAAGTGGAGGCGTCG 10979 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || || ||||| ||||||||||| || ||||| ||||| Sbjct 10980 GACACCATTGAGAATGTGAAGGCGAAGATCCAGGACAAAGAAGGGATTCCTCCAGATCAG 11039 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAAC--GTCAGCGATTATA 24168 || | || || | | |||||||| || ||||||| | | | |||| ||||| | Sbjct 11040 CAACGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGACGCACCCTGTCA--GATTACA 11097 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||| || |||||||| | ||| | ||| |||| ||| | || || Sbjct 11098 ACATTCAGAAGGAATCTACTCTGCATCTGGTGCTAAGGTTGCGCGGTGG 11146 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| || ||||||||| | ||||| | ||||| || || | Sbjct 10008 ATGCAGATATTTGTGAAAACCTTGACTGGAAAAACTATTACATTAGAAGTAGAAGCATCC 10067 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| ||| | || ||| ||||| || ||||||||||| || || || || Sbjct 10068 GATACCATAGAGAATGTAAAAGCGAAGATCCAGGATAAAGAAGGCATTCCGCCAGACCAG 10127 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | || ||||| || ||||||| | | | | |||||||| Sbjct 10128 CAGAGATTGATCTTTGCAGGAAAGCAGCTGGAAGATGGGCGGACCTTGTCTGATTATAAT 10187 Query 24171 ATTCAAAAAGAATCTAC 24187 ||||| || |||||||| Sbjct 10188 ATTCAGAAGGAATCTAC 10204 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || ||| ||||||| ||| | || || | ||||| ||||| Sbjct 8127 ATGCAGATATTCGTTAAGACACTAACTGGTAAAACCATCACATTGGAAGTAGAGGCATCT 8186 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || ||| | || || || ||| || || ||||| || || || ||||| Sbjct 8187 GATACAATTGAGAATGTGAAGGCGAAAATTCAGGATAAGGAAGGGATCCCACCTGATCAG 8246 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||||||||||| | ||||| ||||||||||||| |||| | ||||| || Sbjct 8247 CAGAGACTGATTTTTGCTGGCAAACAACTCGAAGATGGGAGAACTCTATCTGATTACAAT 8306 Query 24171 ATTCAAAAAGAATCTAC 24187 ||||| || |||||||| Sbjct 8307 ATTCAGAAGGAATCTAC 8323 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||||||||| | || || ||| | || || | || || || || Sbjct 9096 ATGCAGATTTTTGTAAAAACTCTTACAGGGAAAACCATAACATTAGAGGTTGAAGCATCT 9155 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || ||| | || ||| ||| ||| || || |||||||| || || || || Sbjct 9156 GACACTATTGAGAATGTAAAAGCAAAAATTCAAGATAAGGAAGGCATCCCACCTGACCAG 9215 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||||| | ||||| ||||| || |||| | | | | || || || Sbjct 9216 CAGAGATTGATTTTTGCTGGCAAACAACTTGAGGATGGCCGCACTCTTTCAGACTACAAT 9275 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || |||||||||||| | ||||| ||| | || | |||||||| Sbjct 9276 ATCCAGAAAGAATCTACACTACATTTGGTGCTGAGGCTCAGAGGAGG 9322 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || ||| | ||||||||| | |||||| | ||||| || || Sbjct 9780 ATGCAGATCTTTGTGAAGACACTTACTGGAAAAACCATTACCCTGGAAGTGGAAGCTTCA 9839 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || ||| ||||| || |||||||| || ||||| || || Sbjct 9840 GACACCATCGAAAATGTGAAAGCGAAGATCCAGGATAAAGAAGGTATTCCTCCAGACCAG 9899 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | |||||||| || ||||||| | | | | || || || Sbjct 9900 CAACGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGACGGACCCTATCTGACTACAAT 9959 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| || || | ||| | ||| |||| ||| |||| || Sbjct 9960 ATTCAGAAAGAGTCCACTTTGCATCTGGTGCTAAGGTTGCGAGGTGG 10006 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || ||||| || || || | || || | || || || || Sbjct 9324 ATGCAGATCTTTGTGAAGACATTGACGGGCAAGACTATAACTTTGGATGTTGAAGCTTCA 9383 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || ||| | || || ||| ||| || || ||||| ||||| || || ||| Sbjct 9384 GATACAATTGAGAATGTTAAGGCAAAAATTCAGGATAAGGAAGGAATACCACCTGACCAA 9443 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | | ||||||||||| ||||||| | | | | ||||| ||| Sbjct 9444 CAGAGGCTAATCTTTGCAGGCAAGCAACTGGAAGATGGACGTACCCTGTCTGATTACAAC 9503 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| |||||||| || | ||| | ||| | |||||| |||| || Sbjct 9504 ATTCAGAAAGAATCCACTTTGCATCTGGTGCTGAGATTGCGAGGTGG 9550 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || ||| | || || || | ||||| | ||||| ||||| Sbjct 10692 ATGCAGATTTTTGTGAAGACACTTACAGGCAAGACAATTACATTGGAAGTGGAGGCTTCA 10751 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || || |||||| ||||||||||| || || || || || Sbjct 10752 GACACCATTGAGAATGTGAAGGCAAAGATACAAGACAAAGAAGGTATTCCACCAGACCAG 10811 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAAC--GTCAGCGATTATA 24168 || | || || | || |||||||| || ||||||| ||| | |||| ||||| | Sbjct 10812 CAACGTCTCATCTTCGCTGGCAAGCAGCTGGAAGATGGACGAACCCTGTCA--GATTACA 10869 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||||||| || ||||| || | ||| | ||| Sbjct 10870 ACATTCAGAAGGAATCCACTTTGCATCTGGTG 10901 >seq302910 Length=12142 Score = 89.7 bits (98), Expect = 4e-13 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||||||||| | || || ||| | || || | ||||| ||| ||| | Sbjct 11339 ATGCAGATTTTTGTAAAAACTCTGACAGGGAAAACAATAACATTGGAAGTTGAG-CCATC 11281 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | || ||| ||| ||| ||||||||||| ||||| || ||||| Sbjct 11280 AGACACAATTGAAAATGTAAAAGCAAAAATTCAAGACAAAGAAGGAATACCGCCAGATCA 11221 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||| || | || | | || || ||||| || |||| |||| || ||||| || Sbjct 11220 ACAGCGATTAATCTTTGCTGGTAAACAACTTGAGGATGGAAGAACTCTCTCAGATTACAA 11161 Query 24170 CATTCAAAAAG 24180 ||| ||||||| Sbjct 11160 CATACAAAAAG 11150 >seq708045 Length=25632 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 || ||||||||| | ||||| || || || || || || | || ||| | || || || Sbjct 10384 AATCAAAATGCAGATATTTGTGAAGACTTTGACGGGGAAGACTATCACCTTAGAGGTAGA 10443 Query 24044 GGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCC 24103 || || || || || | || ||| || || || |||||||| || || || Sbjct 10444 AGCTTCGGATACAATTGAAAATGTTAAAGCCAAAATCCAGGATAAAGAAGGAATTCCCCC 10503 Query 24104 CGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGA 24163 ||||| ||||||||||| | | |||||||| | ||||||| | ||| | || Sbjct 10504 GGATCAGCAGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAACATTGTCTGA 10563 Query 24164 TTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGA 24206 |||||| || || ||||||||||| | || | ||||||||| Sbjct 10564 TTATAATATCCAGAAAGAATCTACTTTACACCTTGTGTTAAGA 10606 >seq302911 Length=9965 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| ||||| || ||||| ||| | || || | ||||| ||| | Sbjct 1014 AATGCAAATATTTGTGAAAACGTTGACTGGCAAAACAATAACATTAGAAGTTGAGCCGTC 955 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | |||||| ||||||| || ||||||||||| || || || || Sbjct 954 AGACACAATAGAAAATGTCAAAGCAAAGATTCAGGATAAAGAAGGCATTCCACCAGACCA 895 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATTAT 24167 ||||| || |||| | || || || | |||||| ||| || | |||| ||||| Sbjct 894 GCAGAGGCTAATTTTTGCAGGGAAACAGTTGGAAGATGGACGGACTCTGTCA--GATTAC 837 Query 24168 AACATTCAAAAAG 24180 || || || |||| Sbjct 836 AATATACAGAAAG 824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422613358531260