Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq708045 104 2e-17
seq741633 96.9 3e-15
seq831174 95.1 1e-14
seq303400 82.4 6e-11
>seq708045
Length=25632
Score = 104 bits (114), Expect = 2e-17
Identities = 170/244 (70%), Gaps = 1/244 (0%)
Strand=Plus/Plus
Query 115270 TTATAAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGT 115329
|||||||| || |||| |||| || ||||| || || | ||||| || || || ||| |
Sbjct 10376 TTATAAGAAATCAAAA-TGCAGATATTTGTGAAGACTTTGACGGGGAAGACTATCACCTT 10434
Query 115330 CGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGG 115389
|| || | || || ||| | | || ||| ||||| |||||||||||
Sbjct 10435 AGAGGTAGAAGCTTCGGATACAATTGAAAATGTTAAAGCCAAAATCCAGGATAAAGAAGG 10494
Query 115390 CGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAAC 115449
| ||| |||||||| ||||| || | ||| ||||| || || ||||||| | |||
Sbjct 10495 AATTCCCCCGGATCAGCAGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAAC 10554
Query 115450 CATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGG 115509
|| | |||||||| || || ||||| |||||| |||| | ||||| ||| | || ||
Sbjct 10555 ATTGTCTGATTATAATATCCAGAAAGAATCTACTTTACACCTTGTGTTAAGACTCCGTGG 10614
Query 115510 AGGA 115513
|||
Sbjct 10615 TGGA 10618
>seq741633
Length=11487
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344
||||||||||||||| || || || || || ||||| ||||| | ||| ||| |
Sbjct 10463 AATGCAAATTTTTGTGAAGACACTTACTGGCAAAACAATTACATTGGAAGTTGAGGCATC 10522
Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||| ||| | | || ||| || ||| |||||||||||| |||| || ||
Sbjct 10523 TGACACAATTGAAAATGTGAAAGCTAAGATTCAAGATAAAGAAGGCATCCCTCCAGACCA 10582
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|| | || || | ||| ||||| || | ||||||| | ||| | | ||||| ||
Sbjct 10583 ACAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGAAGGACCTTATCTGATTACAA 10642
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||| || || || ||| | ||| | ||| |||| |||| |||||
Sbjct 10643 CATTCAGAAGGAATCCACTTTGCATTTAGTGCTGAGGCTGCGTGGAGG 10690
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| |||||||| || || ||||| || || ||||| || | ||| ||| |
Sbjct 8640 ATGCAGATTTTTGTAAAGACCCTCACAGGCAAGACCATCACACTGGAAGTGGAAGCTTCA 8699
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| ||| | | || || ||| || || |||||||| | || || |||
Sbjct 8700 GACACAATTGAAAATGTGAAGGCAAAGATCCAGGACAAAGAAGGAATTCCACCAGACCAG 8759
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
||| | || |||| ||| || || || | ||||||| | || || | ||||| ||
Sbjct 8760 CAACGTCTCATTTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACTCTGTCTGATTACAAT 8819
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||| || || || ||| | ||| |||||||||| |||||||||||
Sbjct 8820 ATTCAGAAGGAATCGACTCTCCATCTGGTGTTGAGGTTGCGAGGAGG 8866
Score = 93.3 bits (102), Expect = 4e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438
||||| ||||| |||| ||||||||| |||||||| | ||| || || |||||||||
Sbjct 8505 GATAAGGAAGGGATCCCACCTGATCAGCAGAGACTTATATTTGCAGGAAAGCAATTAGAA 8564
Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498
|||| | || || | || |||||||||||||| || |||||| | || | ||| |
Sbjct 8565 GATGGCCGTACTTTGTCAGACTATAACATTCAAAAGGAATCTACTCTTCACCTTGTGCTC 8624
Query 115499 AGATTGCGAGGAGG 115512
||| | |||||||
Sbjct 8625 AGACTTAGAGGAGG 8638
Score = 89.7 bits (98), Expect = 4e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 115369 AAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAA 115428
||||||| ||||| ||||| | || ||| || || || || || | ||| |||||
Sbjct 9407 AAAAATTCAGGATAAGGAAGGAATACCACCTGACCAACAGAGGCTAATCTTTGCAGGCAA 9466
Query 115429 ACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACA 115488
||| | ||||||| ||| || | ||||| |||||||| ||||| || ||| | ||
Sbjct 9467 GCAACTGGAAGATGGACGTACCCTGTCTGATTACAACATTCAGAAAGAATCCACTTTGCA 9526
Query 115489 TATGGTGTTGAGATTGCGAGGAGG 115512
| ||||| ||||||||||||| ||
Sbjct 9527 TCTGGTGCTGAGATTGCGAGGTGG 9550
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || ||||| || || || || ||||||||||||||| | ||| ||| |
Sbjct 9780 ATGCAGATCTTTGTGAAGACACTTACTGGAAAAACCATTACCCTGGAAGTGGAAGCTTCA 9839
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| | | | | || ||| || || ||||||||||| | || || |||
Sbjct 9840 GACACCATCGAAAATGTGAAAGCGAAGATCCAGGATAAAGAAGGTATTCCTCCAGACCAG 9899
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
||| | || || | ||| ||||| || | ||||||| ||| | | || || ||
Sbjct 9900 CAACGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGACGGACCCTATCTGACTACAAT 9959
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||| |||||||| ||| | ||| ||||| | || |||||||| ||
Sbjct 9960 ATTCAGAAAGAGTCCACTTTGCATCTGGTGCTAAGGTTGCGAGGTGG 10006
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || || || || || || || ||||||||||||||| | ||| |||| |
Sbjct 10920 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAAACCATTACCTTGGAAGTGGAGGCGTCG 10979
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| ||| | || || || || || |||||||| | || ||||||
Sbjct 10980 GACACCATTGAGAATGTGAAGGCGAAGATCCAGGACAAAGAAGGGATTCCTCCAGATCAG 11039
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
||| | || || | ||| ||||| || | ||||||| ||| || | ||||| |||
Sbjct 11040 CAACGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGACGCACCCTGTCAGATTACAAC 11099
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||| || || |||||| | ||| ||||| | || ||||| || ||
Sbjct 11100 ATTCAGAAGGAATCTACTCTGCATCTGGTGCTAAGGTTGCGCGGTGG 11146
>seq831174
Length=18794
Score = 95.1 bits (104), Expect = 1e-14
Identities = 168/244 (69%), Gaps = 1/244 (0%)
Strand=Plus/Plus
Query 115270 TTATAAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGT 115329
|||||||| || |||| |||| || ||||| || | | ||||| || || || ||| |
Sbjct 4096 TTATAAGAAATCAAAA-TGCAGATATTTGTGAAGAATTTGACGGGGAAGACTATCACCTT 4154
Query 115330 CGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGG 115389
|| || | || || ||| | | || || ||||| |||||||||||
Sbjct 4155 AGAGGTAGAAGCTTCGGATACAATTGAAAATGTTAATGCCAAAATCCAGGATAAAGAAGG 4214
Query 115390 CGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAAC 115449
| ||| |||||||| ||||| || | ||| ||||| || || ||||||| | |||
Sbjct 4215 AATTCCCACGGATCAGCAGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAAC 4274
Query 115450 CATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGG 115509
|| | |||||||| || || ||| | |||||| |||| | ||||||||| | || ||
Sbjct 4275 ATTGTCTGATTATAATATCCAGAAATAATCTACTTTACACCTTGTGTTGAGACTCCGTGG 4334
Query 115510 AGGA 115513
|||
Sbjct 4335 TGGA 4338
>seq303400
Length=5017
Score = 82.4 bits (90), Expect = 6e-11
Identities = 142/205 (69%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 115270 TTATAAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGT 115329
|||||||| || |||| |||| || ||||| || || | |||||||| || || ||| |
Sbjct 4814 TTATAAGAAATCAAAA-TGCAGATATTTGTGAAGACTTTGACGGGAAAGACTATCACCTT 4872
Query 115330 CGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGG 115389
|| || | || || ||| | | || ||| ||||| |||||||||||
Sbjct 4873 AGAGGTAGAAGCTTCGGATACAATTGAAAATGTTAAAGCCAAAATCCAGGATAAAGAAGG 4932
Query 115390 CGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAAC 115449
| ||| |||||||| ||||| || | ||| ||||| || || ||||||| | |||
Sbjct 4933 AATTCCCACGGATCAGCAGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAAC 4992
Query 115450 CATGGCCGATTATAACATTCAAAAA 115474
|| | |||||||| || || |||
Sbjct 4993 ATTGTCTGATTATAATATCCAGAAA 5017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418099569171040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |