Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq708045 104 2e-17 seq741633 96.9 3e-15 seq831174 95.1 1e-14 seq303400 82.4 6e-11 >seq708045 Length=25632 Score = 104 bits (114), Expect = 2e-17 Identities = 170/244 (70%), Gaps = 1/244 (0%) Strand=Plus/Plus Query 115270 TTATAAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGT 115329 |||||||| || |||| |||| || ||||| || || | ||||| || || || ||| | Sbjct 10376 TTATAAGAAATCAAAA-TGCAGATATTTGTGAAGACTTTGACGGGGAAGACTATCACCTT 10434 Query 115330 CGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGG 115389 || || | || || ||| | | || ||| ||||| ||||||||||| Sbjct 10435 AGAGGTAGAAGCTTCGGATACAATTGAAAATGTTAAAGCCAAAATCCAGGATAAAGAAGG 10494 Query 115390 CGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAAC 115449 | ||| |||||||| ||||| || | ||| ||||| || || ||||||| | ||| Sbjct 10495 AATTCCCCCGGATCAGCAGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAAC 10554 Query 115450 CATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGG 115509 || | |||||||| || || ||||| |||||| |||| | ||||| ||| | || || Sbjct 10555 ATTGTCTGATTATAATATCCAGAAAGAATCTACTTTACACCTTGTGTTAAGACTCCGTGG 10614 Query 115510 AGGA 115513 ||| Sbjct 10615 TGGA 10618 >seq741633 Length=11487 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||||||||| || || || || || ||||| ||||| | ||| ||| | Sbjct 10463 AATGCAAATTTTTGTGAAGACACTTACTGGCAAAACAATTACATTGGAAGTTGAGGCATC 10522 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| | | || ||| || ||| |||||||||||| |||| || || Sbjct 10523 TGACACAATTGAAAATGTGAAAGCTAAGATTCAAGATAAAGAAGGCATCCCTCCAGACCA 10582 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || | || || | ||| ||||| || | ||||||| | ||| | | ||||| || Sbjct 10583 ACAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGAAGGACCTTATCTGATTACAA 10642 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||| || || || ||| | ||| | ||| |||| |||| ||||| Sbjct 10643 CATTCAGAAGGAATCCACTTTGCATTTAGTGCTGAGGCTGCGTGGAGG 10690 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||| || || ||||| || || ||||| || | ||| ||| | Sbjct 8640 ATGCAGATTTTTGTAAAGACCCTCACAGGCAAGACCATCACACTGGAAGTGGAAGCTTCA 8699 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || || ||| || || |||||||| | || || ||| Sbjct 8700 GACACAATTGAAAATGTGAAGGCAAAGATCCAGGACAAAGAAGGAATTCCACCAGACCAG 8759 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | || |||| ||| || || || | ||||||| | || || | ||||| || Sbjct 8760 CAACGTCTCATTTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACTCTGTCTGATTACAAT 8819 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| || || || ||| | ||| |||||||||| ||||||||||| Sbjct 8820 ATTCAGAAGGAATCGACTCTCCATCTGGTGTTGAGGTTGCGAGGAGG 8866 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 ||||| ||||| |||| ||||||||| |||||||| | ||| || || ||||||||| Sbjct 8505 GATAAGGAAGGGATCCCACCTGATCAGCAGAGACTTATATTTGCAGGAAAGCAATTAGAA 8564 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| | || || | || |||||||||||||| || |||||| | || | ||| | Sbjct 8565 GATGGCCGTACTTTGTCAGACTATAACATTCAAAAGGAATCTACTCTTCACCTTGTGCTC 8624 Query 115499 AGATTGCGAGGAGG 115512 ||| | ||||||| Sbjct 8625 AGACTTAGAGGAGG 8638 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 115369 AAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAA 115428 ||||||| ||||| ||||| | || ||| || || || || || | ||| ||||| Sbjct 9407 AAAAATTCAGGATAAGGAAGGAATACCACCTGACCAACAGAGGCTAATCTTTGCAGGCAA 9466 Query 115429 ACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACA 115488 ||| | ||||||| ||| || | ||||| |||||||| ||||| || ||| | || Sbjct 9467 GCAACTGGAAGATGGACGTACCCTGTCTGATTACAACATTCAGAAAGAATCCACTTTGCA 9526 Query 115489 TATGGTGTTGAGATTGCGAGGAGG 115512 | ||||| ||||||||||||| || Sbjct 9527 TCTGGTGCTGAGATTGCGAGGTGG 9550 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || || || ||||||||||||||| | ||| ||| | Sbjct 9780 ATGCAGATCTTTGTGAAGACACTTACTGGAAAAACCATTACCCTGGAAGTGGAAGCTTCA 9839 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | | || ||| || || ||||||||||| | || || ||| Sbjct 9840 GACACCATCGAAAATGTGAAAGCGAAGATCCAGGATAAAGAAGGTATTCCTCCAGACCAG 9899 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | || || | ||| ||||| || | ||||||| ||| | | || || || Sbjct 9900 CAACGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGACGGACCCTATCTGACTACAAT 9959 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| |||||||| ||| | ||| ||||| | || |||||||| || Sbjct 9960 ATTCAGAAAGAGTCCACTTTGCATCTGGTGCTAAGGTTGCGAGGTGG 10006 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || || || || || || ||||||||||||||| | ||| |||| | Sbjct 10920 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAAACCATTACCTTGGAAGTGGAGGCGTCG 10979 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | || || || || || |||||||| | || |||||| Sbjct 10980 GACACCATTGAGAATGTGAAGGCGAAGATCCAGGACAAAGAAGGGATTCCTCCAGATCAG 11039 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | || || | ||| ||||| || | ||||||| ||| || | ||||| ||| Sbjct 11040 CAACGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGACGCACCCTGTCAGATTACAAC 11099 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| || || |||||| | ||| ||||| | || ||||| || || Sbjct 11100 ATTCAGAAGGAATCTACTCTGCATCTGGTGCTAAGGTTGCGCGGTGG 11146 >seq831174 Length=18794 Score = 95.1 bits (104), Expect = 1e-14 Identities = 168/244 (69%), Gaps = 1/244 (0%) Strand=Plus/Plus Query 115270 TTATAAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGT 115329 |||||||| || |||| |||| || ||||| || | | ||||| || || || ||| | Sbjct 4096 TTATAAGAAATCAAAA-TGCAGATATTTGTGAAGAATTTGACGGGGAAGACTATCACCTT 4154 Query 115330 CGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGG 115389 || || | || || ||| | | || || ||||| ||||||||||| Sbjct 4155 AGAGGTAGAAGCTTCGGATACAATTGAAAATGTTAATGCCAAAATCCAGGATAAAGAAGG 4214 Query 115390 CGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAAC 115449 | ||| |||||||| ||||| || | ||| ||||| || || ||||||| | ||| Sbjct 4215 AATTCCCACGGATCAGCAGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAAC 4274 Query 115450 CATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGG 115509 || | |||||||| || || ||| | |||||| |||| | ||||||||| | || || Sbjct 4275 ATTGTCTGATTATAATATCCAGAAATAATCTACTTTACACCTTGTGTTGAGACTCCGTGG 4334 Query 115510 AGGA 115513 ||| Sbjct 4335 TGGA 4338 >seq303400 Length=5017 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/205 (69%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 115270 TTATAAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGT 115329 |||||||| || |||| |||| || ||||| || || | |||||||| || || ||| | Sbjct 4814 TTATAAGAAATCAAAA-TGCAGATATTTGTGAAGACTTTGACGGGAAAGACTATCACCTT 4872 Query 115330 CGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGG 115389 || || | || || ||| | | || ||| ||||| ||||||||||| Sbjct 4873 AGAGGTAGAAGCTTCGGATACAATTGAAAATGTTAAAGCCAAAATCCAGGATAAAGAAGG 4932 Query 115390 CGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAAC 115449 | ||| |||||||| ||||| || | ||| ||||| || || ||||||| | ||| Sbjct 4933 AATTCCCACGGATCAGCAGAGACTGATATTTGCTGGCAAGCAGTTGGAAGATGGCCGAAC 4992 Query 115450 CATGGCCGATTATAACATTCAAAAA 115474 || | |||||||| || || ||| Sbjct 4993 ATTGTCTGATTATAATATCCAGAAA 5017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418099569171040