Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_007805.1
Length=39199
Score E
Sequences producing significant alignments: (Bits) Value
seq1291351 154 4e-33
seq217096 125 2e-24
seq1288863 122 2e-23
seq1263006 105 2e-18
>seq1291351
Length=394
Score = 154 bits (170), Expect = 4e-33
Identities = 272/391 (70%), Gaps = 4/391 (1%)
Strand=Plus/Plus
Query 797 ATTCGGGTCGTAAACTTCGTGAAGTCGGCACGCATCGGCTACACGAAAATGCTGATGGCC 856
|| |||||||| || || ||| || || |||||| || || |||||| ||
Sbjct 6 ATCCGGGTCGTGAATATCCGCAAGAGCGCGCGGGTCGGCTTTACCAAGATGCTGCACGCT 65
Query 857 AACATCGGCTACAAGATTCAGCACAAGCGCCGTAATGTGCTGATGTGGAGCCCGACTGAC 916
|||| || |||||| | || |||||||| || || || |||| | |||| || ||
Sbjct 66 AACAAGGGGTACAAGCTCCACCACAAGCGGCGCAACGTCCTGAGCTACTGCCCCACCGAT 125
Query 917 CCAGACGCCGAGGGGATCA-GCAAGAGCCACGTTAATGGCCTGATTCGCGATGTTCCGGT 975
|| ||||| || | | || | |||||| | ||| | | || | ||||| || |||
Sbjct 126 CCTGACGCGGAAGCCAACATGAAAGAGC-ATGTTGAGCCCATGCTCCGCGACGTCGAGGT 184
Query 976 GCTGCTGGCGCTGGCCCCATGGTATGGCCGCAAGCATAGCGACAACACGCTCGACACCAA 1035
|||| | ||||||||| ||| ||| |||||| |||||| | | || ||| | |
Sbjct 185 GCTGACCGAGCTGGCCCCCTGGATCGGCAAAAAGCATCGCGACAGCTCCCT-GACCCGCA 243
Query 1036 GGTGTTTG-CAAACCGGCGGACCCTTTGGACGCTCGGCGGCAAGGCTGCTCGCAACTACC 1094
| | || | ||||| |||| |||| || ||||||||||| | ||||||||||
Sbjct 244 AGCGCCTGACCAACCGCAAGACCTATTGGTGCCTGGGCGGCAAGGCGGGGCGCAACTACC 303
Query 1095 GTGAGAGATCTGCCGACGAGGTGATCTATGACGAGCTGTCGAAGTTCGACGCCGATATTG 1154
| | || |||| | || ||||| || || ||||||||||| |||||||||||| | |
Sbjct 304 GCGGGAAATCTACGGATGAGGTCATTTACGACGAGCTGTCCAAGTTCGACGCCTCGGTCG 363
Query 1155 AAGGTGAAGGTTCCCCAACGTTCCTTGGCGA 1185
|||| || || || || || ||||| |||||
Sbjct 364 AAGGCGAGGGCTCGCCGACATTCCTCGGCGA 394
>seq217096
Length=301
Score = 125 bits (138), Expect = 2e-24
Identities = 180/252 (71%), Gaps = 10/252 (4%)
Strand=Plus/Plus
Query 5760 CGCCGAGTACAAGTACGTCACCCTCGGCGAGCGCGGCGAGCAGATCATCCTGGCCACCTA 5819
|| |||||||||| | | |||| |||| || ||||||||| | ||||| || || |||||
Sbjct 58 CGGCGAGTACAAGCAGGGCACCATCGGTGACCGCGGCGAGAAAATCATTCTCGCGACCTA 117
Query 5820 CGGAGAGCTGTTCAGCATCACCCGTCAGGCGATCATCAACGACGACCTGCAGATGCTCTC 5879
||| | || |||| |||| ||||| |||||||||||||||||| || ||
Sbjct 118 CGGCAAACTCTTCA------CCCGCCAGGCCATCATCAACGACGACCTG--TCCGCCTTC 169
Query 5880 GG--ATATCCCGTTCAAGCTGGGCCAGGCTGCCAAGGCCACCATCGGCGACCTGGTCTAT 5937
|| || ||| | |||| | || || | |||| | || ||||||||||||
Sbjct 170 GGCCGCATTCCGCGCGCCATGGGTCGCGCAGCAATTCGCACCGTTGGTGACCTGGTCTAT 229
Query 5938 GCGGTTCTGACCGGTAACCCGGCGATGAGCGATGGCAAGACTCTCTTCCATGCCGACCAC 5997
|| | |||| | |||| ||| ||| ||| || ||| | || ||||| |||||||||
Sbjct 230 GCCCTGCTGAAAGCGAACCGGGCTATGTCCGACGGTAAGGCGCTGTTCCACGCCGACCAC 289
Query 5998 AGCAACCTGCTC 6009
|||||||||||
Sbjct 290 GGCAACCTGCTC 301
>seq1288863
Length=386
Score = 122 bits (134), Expect = 2e-23
Identities = 213/303 (70%), Gaps = 24/303 (8%)
Strand=Plus/Plus
Query 123 CGCGAGCCTCGGGATTTCTCCGCAAGCCTTTGATAAATGGGGCGTTGAGCCTG----CCG 178
||| |||||||| || || ||||||||||||||||||||||||||| | |||
Sbjct 20 CGCAAGCCTCGGAATCAGCCCCACAGCCTTTGATAAATGGGGCGTTGAGCCGGTTATCCG 79
Query 179 CCAAGATCGGCCGCGAGGTGTTCTATACCGCCCAGGCGGTGCTACAGAATCGCCTCGATC 238
||| | ||||||||| ||||||| ||||| | |||| || | ||||||||| |
Sbjct 80 CCATG----GCCGCGAGGCGTTCTATGACGCCCGGACGGTCCTGGAAAATCGCCTCAGCC 135
Query 239 ATGTGACCCAG---AAACAACAACCTGAGGGCCTAGATGCGGAAGGTCTCGACCCGCTCG 295
| | ||||| ||| | ||||| | || || || || || ||||||| ||||
Sbjct 136 ACG---CCCAGGCGAAATACCAACCCG-----CT-GACGCCGATGGCATCGACCCCCTCG 186
Query 296 CTGAAAAGAAATTGCTACAGGAGCGCCTGCGACTGACGACTGCTCAGGCTGACGCCCAGG 355
| || || || | ||||||||||| || || || || || ||||| || |||||||
Sbjct 187 CGGAGAAAAAGCTCACCCAGGAGCGCCTCCGCCTAACCACGGCCCAGGCCGATGCCCAGG 246
Query 356 AGCAGAAGAACCAGGT--CCAAGCGAAGACCCTTGTTCCAACTCCGTTCGCCACCTTCGC 413
|| |||| ||| ||| || | || || ||| || || | |||||| ||||||||
Sbjct 247 AGAAGAAAAACGCGGTGACCGACCG-CGA-CCTGGTGCCGGCCGAGTTCGCGACCTTCGC 304
Query 414 TCT 416
||
Sbjct 305 CCT 307
>seq1263006
Length=321
Score = 105 bits (116), Expect = 2e-18
Identities = 115/150 (77%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 38504 GTGTTCGACCGCCCGACCCCGTACACCCTGAACAGCCTGCGCATGGTGCCAGCCAGGAAA 38563
||||||||||| || |||||||||||||| |||| |||||| || | || |||| |||
Sbjct 95 GTGTTCGACCGGCCTACCCCGTACACCCTCGACAGTCTGCGCCTGATACCGGCCACCAAA 154
Query 38564 GACCGGCTCGA-AGCGCGGGTTTGGTTCAAGGACGAAGCGGACGGGGCGCAGCCTGCATC 38622
|| | ||| || || ||||| ||| ||||||||||||||||| |||| ||| || |
Sbjct 155 GAGC-GCTTGAGTGCTCGGGTCTGGATCAAGGACGAAGCGGACAAGGCGTCGCCGGCCAC 213
Query 38623 GGTGTGGATTGCCCCCGAGGTCTACGGTGG 38652
| ||| | |||||||||| | ||| ||
Sbjct 214 GCGCTGGCTGACCCCCGAGGTATTCGGCGG 243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123235566999944
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |