Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq741633 96.9 3e-15
seq302910 86.0 5e-12
>seq741633
Length=11487
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| |||| ||||||||| |||| |||||| || || |||||||| |||||||| || |
Sbjct 10462 CCACCTCTTAGCCTCAGAACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAATCTGAT 10403
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | || ||||| ||||| || ||| | || || |||||||| || |||
Sbjct 10402 AAGGTCCTTCCATCTTCCAACTGTTTTCCTGCAAAGATGAGTCGCTGTTGATCTGGAGGA 10343
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||| || ||||| || |||||| || || | | | ||||| | |||
Sbjct 10342 ATGCCTTCCTTGTCTTGGATCTTTGCT--TTGACATTCTCAATGGTGTCAGAAGCTTCCA 10285
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| || || || || || || || || || ||||||||||||||
Sbjct 10284 CCTCCAGAGTAATTGTCTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 10236
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || |||||||| |||| ||||| || || ||||| || |||||||| || | |
Sbjct 9778 CCACCACGCAGCCTCAGCACCAGATGCAAAGTAGATTCCTTCTGAATGTTGTAATCCGAC 9719
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| |||| | || |||| ||| || || ||| | || || ||||| ||||| |||
Sbjct 9718 AGGGTTCGTCCATCTTCCAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCTGGAGGA 9659
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||| || ||||| || ||||| |||||| | | | |||||| | ||
Sbjct 9658 ATGCCTTCCTTGTCCTGGATCTTTGC--CTTCACATTTTCAATAGTGTCTGAAGCTTCTA 9601
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||| || || || || || || || || ||||||||||||||
Sbjct 9600 CCTCCAGGGTAATTGTCTTGCCAGTAAGGGTCTTCACAAAAATCTGCAT 9552
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || |||||||| || | ||||| ||||| ||||| || |||||||| || |
Sbjct 10690 CCTCCACGCAGCCTCAGCACTAAATGCAAAGTGGATTCCTTCTGAATGTTGTAATCAGAT 10631
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | || || | || ||||| ||| | || || ||||||||||| |||
Sbjct 10630 AAGGTCCTTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGAGGG 10571
Query 16829 ACGCCCTCTTTGTCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||| ||||| || || || ||| ||||| | | | ||||| | |||
Sbjct 10570 ATGCCTTCTTTATCTTGAATCTTAGCT--TTCACATTTTCAATTGTGTCAGATGCCTCAA 10513
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
||||| || || ||||| || || || || || |||||||| ||||||
Sbjct 10512 CTTCCAATGTAATTGTTTTGCCAGTAAGTGTCTTCACAAAAATTTGCATT 10463
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|||||||| | ||||| |||| ||| || || || ||||| || || ||||| || | |
Sbjct 8866 CCTCCTCGCAACCTCAACACCAGATGGAGAGTCGATTCCTTCTGAATATTGTAATCAGAC 8807
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | | || |||| || || || ||| |||| || || || ||||| ||
Sbjct 8806 AGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATGAGACGTTGCTGGTCTGGTGGA 8747
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| || |||||||| || ||||| |||||| | | | ||||| | |||
Sbjct 8746 ATTCCTTCTTTGTCCTGGATCTTTGC--CTTCACATTTTCAATTGTGTCTGAAGCTTCCA 8689
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| |||||||| || || || || || || ||||||||||||||
Sbjct 8688 CTTCCAGTGTGATGGTCTTGCCTGTGAGGGTCTTTACAAAAATCTGCAT 8640
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || |||||||| |||| ||||| ||||| ||||| || |||||||| || | |
Sbjct 10918 CCACCACGCAGCCTCAGCACCAGATGCAAAGTGGATTCCTTCTGAATGTTGTAATCTGAC 10859
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| |||| | || |||| || ||||| || | || || || || ||||| ||
Sbjct 10858 AGGGTTCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGA 10799
Query 16829 ACGCCCTCTTTGTCGGCAAT--TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| || |||||||| || |||| |||||| | | | ||||| | ||||
Sbjct 10798 ATACCTTCTTTGTCTTGTATCTTTGC--CTTCACATTCTCAATGGTGTCTGAAGCCTCCA 10741
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| || || || || || || || || || ||||||||||||||
Sbjct 10740 CTTCCAATGTAATTGTCTTGCCTGTAAGTGTCTTCACAAAAATCTGCAT 10692
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/231 (68%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || | ||| || |||| |||||| || || ||||| || |||||||| || | |
Sbjct 11146 CCACCGCGCAACCTTAGCACCAGATGCAGAGTAGATTCCTTCTGAATGTTGTAATCTGAC 11087
Query 16769 ATGGTTTTGGCGTCC----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCAC 16824
| ||| |||||| || | || ||||| ||| | || || || || || ||
Sbjct 11086 AGGGT----GCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCTGG 11031
Query 16825 AGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC 16884
||| | || |||||||| || | | |||||| | | | ||||| | |||
Sbjct 11030 AGGAATCCCTTCTTTGTCCTGGATCTTCGCCTTCACATTCTCAATGGTGTCCGACGCCTC 10971
Query 16885 CGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
| ||||| ||| ||||||||||| || || || || || || ||||||||
Sbjct 10970 CACTTCCAAGGTAATGGTTTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 10920
>seq302910
Length=12142
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || ||||| || |||| ||| | |||||||| || || || |||||||| |
Sbjct 3966 CCACCACGAAGCCTTAGAACCAAATGTAATGTGGACTCTTTCTGAATATTGTAGTCAGAT 4025
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | || ||||||||||| || ||| ||||||||| ||| ||||| ||
Sbjct 4026 AAAGTACGCCCATCTTCCAATTGTTTTCCAGCAAAAATAAGCCTCTGCTGGTCTGGTGGA 4085
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| || |||||||| |||| |||||| | | | ||| || || || |
Sbjct 4086 ATTCCTTCTTTGTCTTGGATTTTGGCCTTCACATTTTCAATAGTATCTGATGGTTCAACT 4145
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| || || ||||| || || | || ||||||||||| |||||
Sbjct 4146 TCCAGTGTTATTGTTTTACCTGTTAATGTCTTGACAAAAATTTGCAT 4192
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398188568021080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |