Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq741633 118 7e-22 seq1341392 98.7 7e-16 seq1373531 91.5 1e-13 seq302910 84.2 2e-11 seq238538 84.2 2e-11 >seq741633 Length=11487 Score = 118 bits (130), Expect = 7e-22 Identities = 156/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| ||||| |||| ||| |||| || |||||||| || ||||| || || | Sbjct 8127 ATGCAGATATTCGTTAAGACACTAACTGGTAAAACCATCACATTGGAAGTAGAGGCATCT 8186 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | || | ||| |||||| ||||| || || | ||||| | Sbjct 8187 GATACAATTGAGAATGTGAAGGCGAAAATTCAGGATAAGGAAGGGATCCCACCTG---AT 8243 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || |||||||| || ||||||||||||||||| |||||| | |||| | | |||||| Sbjct 8244 CAGCAGAGACTGATTTTTGCTGGCAAACAACTCGAAGATGGGAGAACTCTATCTGATTAC 8303 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 |||||||||||||||||||| || || ||||||| Sbjct 8304 AATATTCAGAAGGAATCTACCCTGCACCTGGTATT 8338 Score = 104 bits (114), Expect = 2e-17 Identities = 165/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || || | || || || |||||||| |||| |||||| | Sbjct 11148 ATGCAGATTTTTGTGAAGACTCTTACCGGGAAGACCATTACTCTGGAGGTGGAAGCTTCC 11207 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| ||||| ||||| || || | || | | ||| Sbjct 11208 GACACAATTGAGAATGTGAAGGCGAAAATCCAAGATAAGGAAGGCATTCCCCCAGATCAA 11267 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| |||| |||||||| |||||||| | |||||| | || | | || || ||| Sbjct 11268 CAGCGACTCATCTTTGCAGGCAAACAGTTGGAAGATGGACGTACACTTTCGGACTATAAT 11327 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAATAA 22070 |||||||| ||||| ||||||||| |||| ||||||| |||| ||||||| |||| Sbjct 11328 ATTCAGAAAGAATCCACTCTTCATTTGGTGCTACGTTTGAGAGGTGGATATTGATAA 11384 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| ||| | || ||| | || |||||||| ||||| ||||| || || | Sbjct 10463 AATGCAAATTTTTGTGAAGACACTTACTGGCAAAACAATTACATTGGAAGTTGAGGCATC 10522 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | || | || || ||| |||||||| || | ||| | |||| Sbjct 10523 TGACACAATTGAAAATGTGAAAGCTAAGATTCAAGATAAAGAAGGCATCCCTCCAGACCA 10582 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 |||| | || |||||||||||||| || || |||||| || || | | |||||||| Sbjct 10583 ACAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGAAGGACCTTATCTGATTACAA 10642 Query 22013 TATTCAGAAGGAATCTACTCTTCAT 22037 |||||||||||||| ||| | ||| Sbjct 10643 CATTCAGAAGGAATCCACTTTGCAT 10667 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || || | || ||||| ||||| || ||||| |||||| || Sbjct 8640 ATGCAGATTTTTGTAAAGACCCTCACAGGCAAGACCATCACACTGGAAGTGGAAGCTTCA 8699 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| ||| || || ||||| || | || | |||| Sbjct 8700 GACACAATTGAAAATGTGAAGGCAAAGATCCAGGACAAAGAAGGAATTCCACCAGACCAG 8759 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | || || |||||||| || || || |||||| ||| || | ||||||||| Sbjct 8760 CAACGTCTCATTTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACTCTGTCTGATTACAAT 8819 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||||||||| ||||| ||| |||| || | || |||||||| Sbjct 8820 ATTCAGAAGGAATCGACTCTCCATCTGGTGTTGAGGTTGCGAGGAGG 8866 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || || | || ||||| || |||||| |||| ||||| || Sbjct 9552 ATGCAGATTTTTGTGAAGACCCTTACTGGCAAGACAATTACCCTGGAGGTAGAAGCTTCA 9611 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| ||| || || || || || | ||| | |||| Sbjct 9612 GACACTATTGAAAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCAG 9671 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| | || ||||||||||| || ||||| |||||| | ||| || | |||||||| Sbjct 9672 CAGCGTCTCATCTTTGCTGGTAAGCAACTGGAAGATGGACGAACCCTGTCGGATTACAAC 9731 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGT 22042 |||||||||||||||||| | ||| |||| Sbjct 9732 ATTCAGAAGGAATCTACTTTGCATCTGGT 9760 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || ||| | || || |||||||||||| ||||| |||||| || Sbjct 9780 ATGCAGATCTTTGTGAAGACACTTACTGGAAAAACCATTACCCTGGAAGTGGAAGCTTCA 9839 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || || || |||||||| ||| | ||| | |||| Sbjct 9840 GACACCATCGAAAATGTGAAAGCGAAGATCCAGGATAAAGAAGGTATTCCTCCAGACCAG 9899 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | || |||||||||||||| || || |||||| | || | | || |||||| Sbjct 9900 CAACGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGACGGACCCTATCTGACTACAAT 9959 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||| || || ||| | ||| |||| || | || ||||| || Sbjct 9960 ATTCAGAAAGAGTCCACTTTGCATCTGGTGCTAAGGTTGCGAGGTGG 10006 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || ||| | || ||||| || ||||| ||||| ||| || || Sbjct 10692 ATGCAGATTTTTGTGAAGACACTTACAGGCAAGACAATTACATTGGAAGTGGAGGCTTCA 10751 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| ||| || || ||||| ||| | || | |||| Sbjct 10752 GACACCATTGAGAATGTGAAGGCAAAGATACAAGACAAAGAAGGTATTCCACCAGACCAG 10811 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | || ||||| |||||||| || || |||||| | ||| || | |||||||| Sbjct 10812 CAACGTCTCATCTTCGCTGGCAAGCAGCTGGAAGATGGACGAACCCTGTCAGATTACAAC 10871 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGT 22042 |||||||||||||| ||| | ||| |||| Sbjct 10872 ATTCAGAAGGAATCCACTTTGCATCTGGT 10900 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | || || | || || |||||||||||| ||||| ||| || | Sbjct 10920 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAAACCATTACCTTGGAAGTGGAGGCGTCG 10979 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| || || || ||||| || | ||| | | || Sbjct 10980 GACACCATTGAGAATGTGAAGGCGAAGATCCAGGACAAAGAAGGGATTCCTCCAGATCAG 11039 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | || |||||||||||||| || || |||||| | || || | |||||||| Sbjct 11040 CAACGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGACGCACCCTGTCAGATTACAAC 11099 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||||||||||||||| ||| |||| || | || || || || Sbjct 11100 ATTCAGAAGGAATCTACTCTGCATCTGGTGCTAAGGTTGCGCGGTGG 11146 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 ||||| || ||| | || | |||||||||| || ||||| || || || ||||| ||| Sbjct 7992 GATAAGGAAGGTATTCCACCAGACCAACAGAGGCTGATCTTCGCAGGGAAGCAACTCGAA 8051 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||| || || | |||||||| ||||||||||||||||| || ||| ||||| || Sbjct 8052 GATGGTCGTACACTGTCTGATTACAACATTCAGAAGGAATCTACCCTCCATTTGGTACTA 8111 Query 22047 CGTTTACGAGGAGG 22060 | || |||| || Sbjct 8112 AGATTGAGAGGTGG 8125 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| |||||| | ||||| || || || ||||| ||||| | ||| ||||| | Sbjct 10008 ATGCAGATATTTGTGAAAACCTTGACTGGAAAAACTATTACATTAGAAGTAGAAGCATCC 10067 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || || || |||||||| || | || | |||| Sbjct 10068 GATACCATAGAGAATGTAAAAGCGAAGATCCAGGATAAAGAAGGCATTCCGCCAGACCAG 10127 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | |||||||| || || || || |||||| || || | ||||| ||| Sbjct 10128 CAGAGATTGATCTTTGCAGGAAAGCAGCTGGAAGATGGGCGGACCTTGTCTGATTATAAT 10187 Query 22014 ATTCAGAAGGAATCTACTCTTCAT 22037 |||||||||||||||||||| ||| Sbjct 10188 ATTCAGAAGGAATCTACTCTGCAT 10211 >seq1341392 Length=603 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| |||||| | || || | || ||||| ||||| || ||||| |||||| || Sbjct 281 ATGCAGATATTTGTAAAGACCCTCACAGGCAAGACCATAACATTGGAAGTTGAAGCCTCA 340 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| || ||| ||||| || || | || | | ||| Sbjct 341 GACACTATAGAAAATGTCAAGGCGAAGATTCAGGATAAGGAAGGCATTCCACCAGATCAA 400 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| || ||||| || || || ||||| |||||| || || | |||||||| Sbjct 401 CAGAGGCTGATCTTCGCAGGGAAGCAACTCGAAGATGGTCGTACACTGTCTGATTACAAC 460 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||||||||||||||| || ||| ||||| || | || |||| || Sbjct 461 ATTCAGAAGGAATCTACCCTCCATTTGGTACTAAGATTGAGAGGTGG 507 >seq1373531 Length=884 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || |||||||| | || || || || ||||| |||| |||||| | Sbjct 386 ATGCAGATCTTCGTTAAAACACTGACAGGGAAGACTATTACATTGGAGGTTGAAGCCTCT 327 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | || | ||| |||||| || || || || | ||| | |||| Sbjct 326 GATACGATTGAGAATGTGAAGGCTAAAATTCAAGACAAGGAAGGAATTCCTCCAGACCAG 267 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| || || |||||||| ||||||||||||||| | |||| || | || |||||| Sbjct 266 CAGAGGCTGATATTTGCTGGGAAACAACTAGAAGATGGCAGAACTTTGTCAGACTACAAT 207 Query 22014 ATTCAGAA 22021 || ||||| Sbjct 206 ATCCAGAA 199 >seq302910 Length=12142 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || |||||||| || ||||| || || ||||| ||| | || Sbjct 4192 ATGCAAATTTTTGTCAAGACATTAACAGGTAAAACAATAACACTGGAAGTTGAACCATCA 4133 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| ||||| || ||||| || | || | |||| Sbjct 4132 GATACTATTGAAAATGTGAAGGCCAAAATCCAAGACAAAGAAGGAATTCCACCAGACCAG 4073 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| ||||| |||||||| |||||| | |||||| ||| | | || |||||| Sbjct 4072 CAGAGGCTTATTTTTGCTGGAAAACAATTGGAAGATGGGCGTACTTTATCTGACTACAAT 4013 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGT 22042 |||||||| || || || | ||| |||| Sbjct 4012 ATTCAGAAAGAGTCCACATTACATTTGGT 3984 >seq238538 Length=16363 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 21825 TAGTGCAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACG 21884 |||| || |||||||| || | || || | ||||| ||||||||||| | || Sbjct 10719 TAGTTTAAGATGCAAATTTTCGTGAAGACCCTTACGGGGAAAACCATTACTTTAGAGGTA 10660 Query 21885 GAAGCCGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCT 21944 |||||| |||| || | | || | ||| || ||| ||||| || ||| | || Sbjct 10659 GAAGCCTCAGACACAATTGAAAATGTGAAGGCGAAGATTCAAGATAAGGAAGGTATTCCA 10600 Query 21945 GTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCC 22004 | |||| |||||| | |||||||||||||| || | |||||| || ||| | | Sbjct 10599 CCAGACCAGCAGAGATTGATCTTTGCTGGCAAGCAGTTGGAAGATGGAAGGACTCTTTCT 10540 Query 22005 GATTACAATATTCAGAAGG 22023 |||||||| ||||| |||| Sbjct 10539 GATTACAACATTCAAAAGG 10521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 352025242132168