Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq445738 95.1 3e-16 seq21398 77.0 8e-11 >seq445738 Length=7209 Score = 95.1 bits (104), Expect = 3e-16 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 3344 GAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGG 3403 |||| ||||||| | | || ||| ||||| |||||||||||||| || || | || Sbjct 6660 GAGTGTTTCCAAAAGTGACGAAATGCACTTTCCACAAATACGGTCCATCAGGTAGCGTGC 6719 Query 3404 AAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTT 3463 ||| | ||| || || ||| |||| || ||| | |||||||||||||||||| ||| Sbjct 6720 AAACTTTCGATGGCCTATGCGTCCTTCCACTGAATATTGTCAACGAGAAGATCTACGTTT 6779 Query 3464 TCCTCTGGTTCTGGTTC 3480 | || ||||| |||||| Sbjct 6780 TTCTTTGGTTTTGGTTC 6796 >seq21398 Length=1319 Score = 77.0 bits (84), Expect = 8e-11 Identities = 53/60 (88%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 3421 TGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTC 3480 |||||||| ||| ||||||||| ||||||||||||||| | ||||| |||||||||||| Sbjct 674 TGCATCCTGCCGCTGAACGTGGTGAACGAGAAGATCTACGTGTTCCTGTGGTTCTGGTTC 733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12289242342000