Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq600855 102 7e-17 >seq600855 Length=4662 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 20243 GTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCC 20302 |||||| ||| | ||| | || || || | ||||||||| | ||||| ||||| || Sbjct 2588 GTAACAGCAGCTAACATGCATGTCAATAGAGCATAGCTGGCTACATTAAATGGAACACCA 2529 Query 20303 AAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAA 20362 | ||||| ||| | || || || || ||||| || || ||||| || | ||||||||| Sbjct 2528 AGTCCCATATCTGCTGATCTTTGGTATAGCTGGCATGACAGCTCCCCATTTGCTACATAA 2469 Query 20363 AATTG-ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCA 20421 ||||| || | ||| || || || || || ||||| | ||| || |||||||| Sbjct 2468 AATTGTACCAAGCAA-TGGCAAGGGGGCAGAGCCATAAGGCCCAAATCTCGTGGGTTCCA 2410 Query 20422 CGCACACATAATGATTCTTCTATCGTGCGGATT 20454 ||||||||| ||||| | | ||| | ||||| Sbjct 2409 CGCACACATGATGATGCGGCGATCATCTGGATT 2377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433858513209160