Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1116833 114 1e-20 seq876494 114 1e-20 seq687094 114 1e-20 seq1009670 109 4e-19 seq834711 109 4e-19 seq374033 87.8 1e-12 >seq1116833 Length=771 Score = 114 bits (126), Expect = 1e-20 Identities = 87/99 (88%), Gaps = 3/99 (3%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAAC 114390 |||||||| |||||||||||||||| |||||||||||||| || ||| |||||||||||| Sbjct 277 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTGGGTACGATCTAAGGAAC 336 Query 114391 CAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 || ||||||| || ||||||||||| ||| || ||||| Sbjct 337 CATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 375 Score = 114 bits (126), Expect = 1e-20 Identities = 87/99 (88%), Gaps = 3/99 (3%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAAC 115587 |||||||| |||||||||||||||| |||||||||||||| || ||| |||||||||||| Sbjct 277 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTGGGTACGATCTAAGGAAC 336 Query 115588 CAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 || ||||||| || ||||||||||| ||| || ||||| Sbjct 337 CATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 375 >seq876494 Length=2791 Score = 114 bits (126), Expect = 1e-20 Identities = 87/99 (88%), Gaps = 3/99 (3%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAAC 115587 |||||||| |||||||||||||||| |||||||||||||| || ||| |||||||||||| Sbjct 384 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTGGGTACGATCTAAGGAAC 325 Query 115588 CAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 || ||||||| || ||||||||||| ||| || ||||| Sbjct 324 CATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 286 Score = 114 bits (126), Expect = 1e-20 Identities = 87/99 (88%), Gaps = 3/99 (3%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAAC 114390 |||||||| |||||||||||||||| |||||||||||||| || ||| |||||||||||| Sbjct 384 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTGGGTACGATCTAAGGAAC 325 Query 114391 CAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 || ||||||| || ||||||||||| ||| || ||||| Sbjct 324 CATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 286 >seq687094 Length=7747 Score = 114 bits (126), Expect = 1e-20 Identities = 87/99 (88%), Gaps = 3/99 (3%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAAC 114390 |||||||| |||||||||||||||| |||||||||||||| || ||| |||||||||||| Sbjct 7139 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTGGGTACGATCTAAGGAAC 7198 Query 114391 CAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 || ||||||| || ||||||||||| ||| || ||||| Sbjct 7199 CATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 7237 Score = 114 bits (126), Expect = 1e-20 Identities = 87/99 (88%), Gaps = 3/99 (3%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAAC 115587 |||||||| |||||||||||||||| |||||||||||||| || ||| |||||||||||| Sbjct 7139 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTGGGTACGATCTAAGGAAC 7198 Query 115588 CAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 || ||||||| || ||||||||||| ||| || ||||| Sbjct 7199 CATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 7237 >seq1009670 Length=3830 Score = 109 bits (120), Expect = 4e-19 Identities = 86/99 (87%), Gaps = 3/99 (3%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAAC 114390 |||||||| |||||||||||||||| |||||||||||||| || ||| |||||||||||| Sbjct 1393 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTGGGTACGATCTAAGGAAC 1452 Query 114391 CAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 || ||||||| || ||||||| ||| ||| || ||||| Sbjct 1453 CATAACTGATTTAATGAGCCACTCGCGGTTTCACCTTAA 1491 Score = 109 bits (120), Expect = 4e-19 Identities = 86/99 (87%), Gaps = 3/99 (3%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAAC 115587 |||||||| |||||||||||||||| |||||||||||||| || ||| |||||||||||| Sbjct 1393 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTGGGTACGATCTAAGGAAC 1452 Query 115588 CAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 || ||||||| || ||||||| ||| ||| || ||||| Sbjct 1453 CATAACTGATTTAATGAGCCACTCGCGGTTTCACCTTAA 1491 >seq834711 Length=16661 Score = 109 bits (120), Expect = 4e-19 Identities = 86/99 (87%), Gaps = 3/99 (3%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAAC 114390 |||||||| |||||||||||||||| || ||||||||||| || ||| |||||||||||| Sbjct 1237 CATGTATTAGCTCTAGAATTACCACAGTAATCCAAGTAACGTGGGTACGATCTAAGGAAC 1296 Query 114391 CAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 || ||||||| || ||||||||||| ||| || ||||| Sbjct 1297 CATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 1335 Score = 109 bits (120), Expect = 4e-19 Identities = 86/99 (87%), Gaps = 3/99 (3%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAAC 115587 |||||||| |||||||||||||||| || ||||||||||| || ||| |||||||||||| Sbjct 1237 CATGTATTAGCTCTAGAATTACCACAGTAATCCAAGTAACGTGGGTACGATCTAAGGAAC 1296 Query 115588 CAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 || ||||||| || ||||||||||| ||| || ||||| Sbjct 1297 CATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 1335 >seq374033 Length=4020 Score = 87.8 bits (96), Expect = 1e-12 Identities = 63/69 (91%), Gaps = 3/69 (4%) Strand=Plus/Minus Query 115530 TCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAA 115586 ||||||||| |||||||||||||||| |||||||||||||| || ||| ||||||||||| Sbjct 3522 TCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTGGGTACGATCTAAGGAA 3463 Query 115587 CCAAAACTG 115595 ||| ||||| Sbjct 3462 CCATAACTG 3454 Score = 87.8 bits (96), Expect = 1e-12 Identities = 63/69 (91%), Gaps = 3/69 (4%) Strand=Plus/Minus Query 114333 TCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAA 114389 ||||||||| |||||||||||||||| |||||||||||||| || ||| ||||||||||| Sbjct 3522 TCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTGGGTACGATCTAAGGAA 3463 Query 114390 CCAAAACTG 114398 ||| ||||| Sbjct 3462 CCATAACTG 3454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 390299659508584