Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq1198856 104 1e-17 >seq1198856 Length=229 Score = 104 bits (114), Expect = 1e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 60116 CTTGGCAAGGCGGAACGTGACATCAGGAACGATAACTCCTAGGGAGAGAGTCTTAATACG 60175 |||||| || ||| |||| || || | || || || ||||| || ||||| || || Sbjct 145 CTTGGCCAGCTCGAAGGTGATGTCCGGGATGACCACGCCGAGGGACAGGGTCTTGATGCG 86 Query 60176 GATCTTCTCGTCGGCGTTTTCACGCTTGGTATCCAGGAACGCAAGGATGTCGGGGTGGTG 60235 |||||||||||||||||| || |||||||| || ||||| |||||||| |||||||| Sbjct 85 GATCTTCTCGTCGGCGTTCTCGCGCTTGGTGTCGAGGAATCTCAGGATGTCCGGGTGGTG 26 Query 60236 TGCGTTCAAATATACCGCCCCTGCG 60260 || || | || || ||||| ||| Sbjct 25 GGCATTGAGGTAGACGGCCCCGGCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 221883415658480