Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq741633 154 3e-32 seq708045 152 1e-31 seq302910 149 1e-30 seq831174 140 8e-28 seq303400 132 1e-25 seq1341392 122 2e-22 seq440555 118 2e-21 seq302911 109 1e-18 seq31008 102 2e-16 seq29170 87.8 4e-12 >seq741633 Length=11487 Score = 154 bits (170), Expect = 3e-32 Identities = 164/215 (76%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || | ||||| ||| |||||| || ||||||||||| | || || ||||| ||| Sbjct 11359 AGCACCAAATGAAGAGTGGATTCTTTCTGAATATTATAGTCCGAAAGTGTACGTCCATCT 11300 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTA 288378 || || ||||| ||||| ||||| || ||||||||| |||||| || ||||| ||| Sbjct 11299 TCCAACTGTTTGCCTGCAAAGATGAGTCGCTGTTGA---TCTGGGGGAATGCCTTCCTTA 11243 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438 || ||||||||||| ||||| || || || | ||| | ||| || || || || || Sbjct 11242 TCTTGGATTTTCGCCTTCACATTCTCAATTGTGTCGGAAGCTTCCACCTCCAGAGTAATG 11183 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| |||||||| || || |||||||| Sbjct 11182 GTCTTCCCGGTAAGAGTCTTCACAAAAATCTGCAT 11148 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | ||| ||||| | ||| | || ||| || || || || || || | Sbjct 8125 CCACCTCTCAATCTTAGTACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGAC 8066 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | ||| || |||||||||||||| | |||||| ||| Sbjct 8065 AGTGTACGACCATCTTCGAGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGGTCTGGTGGA 8006 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| |||||||| || || ||||| || ||||| || | || | |||||| Sbjct 8005 ATACCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCTGATGCCTCTACT 7946 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 7945 TCAAGGGTGATTGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 7899 Score = 120 bits (132), Expect = 7e-22 Identities = 169/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || | || || || ||||| | ||| ||||| || ||||| |||| Sbjct 10010 CATG-CCACCTCGCAACCTTAGCACCAGATGCAAAGTGGACTCTTTCTGAATATTGTAGT 9952 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | || || ||||| ||||| | || || || || ||||| ||||| || || | Sbjct 9951 CAGATAGGGTCCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGG---T 9895 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 |||| || ||||||||||||||||| ||||||||||| ||||| || | || | Sbjct 9894 CTGGAGGAATACCTTCTTTATCCTGGATCTTCGCTTTCACATTTTCGATGGTGTCTGAAG 9835 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| ||||| || || || || || || || || ||||| || || |||||||| Sbjct 9834 CTTCCACTTCCAGGGTAATGGTTTTTCCAGTAAGTGTCTTCACAAAGATCTGCAT 9780 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || ||||| || || | || || | || ||||| | |||||| || || || Sbjct 8318 TTCCTTCTGAATATTGTAATCAGATAGAGTTCTCCCATCTTCGAGTTGTTTGCCAGCAAA 8259 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | ||| ||| | |||||| ||||| |||||||| |||||||| ||||| || Sbjct 8258 AATCAGTCTCTGCTGATCAGGTGGGATCCCTTCCTTATCCTGAATTTTCGCCTTCACATT 8199 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| | |||||||| | ||||| || || || || || ||||| || Sbjct 8198 CTCAATTGTATCAGATGCCTCTACTTCCAATGTGATGGTTTTACCAGTTAGTGTCTTAAC 8139 Query 288462 GAATATCTGCAT 288473 |||||||||||| Sbjct 8138 GAATATCTGCAT 8127 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || | || || || ||||| | || ||| || || |||||||| || | Sbjct 10234 CCACCACGCAACCTCAGGACAAGATGCAGAGTAGATTCCTTCTGAATATTATAATCAGAC 10175 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || ||||| | || |||||||| ||||||| | ||| || ||||| Sbjct 10174 AAGGTCCGCCCATCTTCCAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGG---TCTGGC 10118 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||||||||||||||| |||||||| || || ||||| | |||| | |||| Sbjct 10117 GGAATGCCTTCTTTATCCTGGATCTTCGCTTTTACATTCTCTATGGTATCGGATGCTTCT 10058 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | || || || || || |||| || || || ||||||||||| Sbjct 10057 ACTTCTAATGTAATAGTTTTTCCAGTCAAGGTTTTCACAAATATCTGCAT 10008 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 || ||||| || || |||| || ||||| || || || || || | | ||||| Sbjct 9085 AGCCTAAGAACCAGGTGAAGTGTAGACTCTTTCTGAATGTTGTAATCTGACAAAGTGCGG 9026 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 || ||||| | ||||||||||| || |||| | |||||| ||| || ||||| Sbjct 9025 CCATCTTCAAGCTGTTTTCCTGCAAAAATCAATCTCTGTTGGTCTGGTGGTATACCTTCC 8966 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 || |||||||| || || |||||||| ||||| | || | || |||||||| || Sbjct 8965 TTGTCCTGGATCTTTGCCTTCACGTTCTCTATGGTGTCTGATGCCTCCACTTCGAGTGTT 8906 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||||||||| || || |||||||| Sbjct 8905 ATAGTTTTGCCAGTCAGAGTCTTTACAAAGATCTGCAT 8868 Score = 107 bits (118), Expect = 4e-18 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | || || || || | ||| | || ||| |||||||| || || || | Sbjct 10463 TCCACCTCTTAGCCTCAGAACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAATCTGA 10404 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363 | || | ||| ||||| || ||||||||||| ||||| || |||||||| |||| Sbjct 10403 TAAGGTCCTTCCATCTTCCAACTGTTTTCCTGCAAAGATGAGTCGCTGTTG---ATCTGG 10347 Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 || || ||||| || || ||||| || ||||| || || || || | || | ||| Sbjct 10346 AGGAATGCCTTCCTTGTCTTGGATCTTTGCTTTGACATTCTCAATGGTGTCAGAAGCTTC 10287 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| || || |||||||| || || |||||||| Sbjct 10286 CACCTCCAGAGTAATTGTCTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 10236 Score = 104 bits (114), Expect = 5e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || ||||| || || | || ||||| || ||||| | || || || || || Sbjct 8831 TTCCTTCTGAATATTGTAATCAGACAGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAA 8772 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || ||||| || || ||| ||||||||||| |||||||| || || ||||| || Sbjct 8771 AATGAGACGTTGCTGGTCTGGTGGAATTCCTTCTTTGTCCTGGATCTTTGCCTTCACATT 8712 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | || | ||| ||||| || ||||| ||||| || || || ||||| || Sbjct 8711 TTCAATTGTGTCTGAAGCTTCCACTTCCAGTGTGATGGTCTTGCCTGTGAGGGTCTTTAC 8652 Query 288462 GAATATCTGCAT 288473 || |||||||| Sbjct 8651 AAAAATCTGCAT 8640 Score = 84.2 bits (92), Expect = 5e-11 Identities = 158/231 (68%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || || || || | ||| | ||| ||| || || || || || || | Sbjct 10690 CCTCCACGCAGCCTCAGCACTAAATGCAAAGTGGATTCCTTCTGAATGTTGTAATCAGAT 10631 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 | || | ||| ||||| | || || || || ||||| ||||||||||| ||||| Sbjct 10630 AAGGTCCTTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGG---TCTGGA 10574 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||| ||||||||||| || || || |||||||| ||||| || | || | || Sbjct 10573 GGGATGCCTTCTTTATCTTGAATCTTAGCTTTCACATTTTCAATTGTGTCAGATGCCTCA 10514 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| | || || || || || || || ||||| || || || |||||| Sbjct 10513 ACTTCCAATGTAATTGTTTTGCCAGTAAGTGTCTTCACAAAAATTTGCATT 10463 >seq708045 Length=25632 Score = 152 bits (168), Expect = 1e-31 Identities = 183/246 (74%), Gaps = 7/246 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| |||||||| | || || || | || |||||| ||||||||||| || | Sbjct 10618 TCCACCACGGAGTCTTAACACAAGGTGTAAAGTAGATTCTTTCTGGATATTATAATCAGA 10559 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || || || ||||| || || || || || || ||||| | ||| ||| || || Sbjct 10558 CAATGTTCGGCCATCTTCCAACTGCTTGCCAGCAAATATCAGTCTCTGCTGA---TCCGG 10502 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | ||||||||||||||||||||||| ||||| || ||||| || | ||| | ||| Sbjct 10501 GGGAATTCCTTCTTTATCCTGGATTTTGGCTTTAACATTTTCAATTGTATCCGAAGCTTC 10442 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATT 288482 ||| || | ||||| |||||||| |||| |||||| || |||||||||||| || | || Sbjct 10441 TACCTCTAAGGTGATAGTCTTCCCCGTCAAAGTCTTCACAAATATCTGCATTTTGAT-TT 10383 Query 288483 CTAATA 288488 || ||| Sbjct 10382 CTTATA 10377 >seq302910 Length=12142 Score = 149 bits (164), Expect = 1e-30 Identities = 147/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 ||||||||||||| || || | ||| || || || ||||||| |||||| |||||||||| Sbjct 4320 CTTTTTGGATATTGTAATCTGAGAGGGTACGACCATCTTCTAGTTGTTTCCCTGCGAAGA 4379 Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403 | || | ||||||| | |||||| |||||||||||||||||||| || || || |||| Sbjct 4380 TGAGCCTCTGTTGATCAGGTGGGATCCCTTCTTTATCCTGGATTTTTGCCTTAACATTTT 4439 Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 |||| | ||| | ||| ||||| || || || || || || || ||||| || || | Sbjct 4440 CTATGGTATCTGATGGTTCCACTTCCAGAGTTATTGTTTTACCAGTGAGAGTTTTCACAA 4499 Query 288464 ATATCTGCAT 288473 | || ||||| Sbjct 4500 AAATTTGCAT 4509 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || || || || | ||| | ||| ||||| || ||||| ||||| | Sbjct 3966 CCACCACGAAGCCTTAGAACCAAATGTAATGTGGACTCTTTCTGAATATTGTAGTCAGAT 4025 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || ||||| ||||||||||| || || || || | ||| || ||| Sbjct 4026 AAAGTACGCCCATCTTCCAATTGTTTTCCAGCAAAAATAAGCCTCTGCTGGTCTGGTGGA 4085 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||||||||| || |||||||| || ||||| ||||| |||| ||| | ||| ||| Sbjct 4086 ATTCCTTCTTTGTCTTGGATTTTGGCCTTCACATTTTCAATAGTATCTGATGGTTCAACT 4145 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || || || | |||||||| || || ||||| Sbjct 4146 TCCAGTGTTATTGTTTTACCTGTTAATGTCTTGACAAAAATTTGCAT 4192 Score = 102 bits (112), Expect = 2e-16 Identities = 139/193 (72%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 ||||||| || || || || | ||| || | ||| || || | |||||| || || |||| Sbjct 11150 CTTTTTGTATGTTGTAATCTGAGAGAGTTCTTCCATCCTCAAGTTGTTTACCAGCAAAGA 11209 Query 288344 TCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGT 288400 | | ||||||||| ||||| ||||||||||| || || ||||| ||||| || | Sbjct 11210 TTAATCGCTGTTGA---TCTGGCGGTATTCCTTCTTTGTCTTGAATTTTTGCTTTTACAT 11266 Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 |||| || | || | || ||||| | || || || ||||| |||||||| || | Sbjct 11267 TTTCAATTGTGTCTGATGGCTCAACTTCCAATGTTATTGTTTTCCCTGTCAGAGTTTTTA 11326 Query 288461 CGAATATCTGCAT 288473 | || |||||||| Sbjct 11327 CAAAAATCTGCAT 11339 >seq831174 Length=18794 Score = 140 bits (154), Expect = 8e-28 Identities = 181/246 (74%), Gaps = 7/246 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| |||||||| | || || || | || || ||| ||||||||||| || | Sbjct 4338 TCCACCACGGAGTCTCAACACAAGGTGTAAAGTAGATTATTTCTGGATATTATAATCAGA 4279 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATC--T 288363 | || || || ||||| || || || || || || ||||| | ||| ||| || | Sbjct 4278 CAATGTTCGGCCATCTTCCAACTGCTTGCCAGCAAATATCAGTCTCTGCTGA---TCCGT 4222 Query 288364 GGGA-TTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 |||| |||||||||||||||||||||| || || || ||||| || | ||| | ||| Sbjct 4221 GGGAATTCCTTCTTTATCCTGGATTTTGGCATTAACATTTTCAATTGTATCCGAAGCTTC 4162 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATT 288482 ||| || | ||||| |||||||| |||| | |||| || |||||||||||| || | || Sbjct 4161 TACCTCTAAGGTGATAGTCTTCCCCGTCAAATTCTTCACAAATATCTGCATTTTGAT-TT 4103 Query 288483 CTAATA 288488 || ||| Sbjct 4102 CTTATA 4097 >seq303400 Length=5017 Score = 132 bits (146), Expect = 1e-25 Identities = 156/207 (75%), Gaps = 7/207 (3%) Strand=Plus/Minus Query 288285 TTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGAT 288344 ||| ||||||||||| || | | || || || ||||| || || || || || || || Sbjct 5017 TTTCTGGATATTATAATCAGACAATGTTCGGCCATCTTCCAACTGCTTGCCAGCAAATAT 4958 Query 288345 CAGACGCTGTTGAGAATC--TGGGA-TTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | ||| ||| || ||||| |||||||||||||||||||||| ||||| || || Sbjct 4957 CAGTCTCTGCTGA---TCCGTGGGAATTCCTTCTTTATCCTGGATTTTGGCTTTAACATT 4901 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | ||| | |||||| || | ||||| ||||| || |||| |||||| || Sbjct 4900 TTCAATTGTATCCGAAGCTTCTACCTCTAAGGTGATAGTCTTTCCCGTCAAAGTCTTCAC 4841 Query 288462 GAATATCTGCATTATGTTATTCTAATA 288488 |||||||||||| || | |||| ||| Sbjct 4840 AAATATCTGCATTTTGAT-TTCTTATA 4815 >seq1341392 Length=603 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | ||| ||||| | ||| | || ||| || || || || || || | Sbjct 507 CCACCTCTCAATCTTAGTACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGAC 448 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | ||| || |||||||||||||| | ||||||| ||| Sbjct 447 AGTGTACGACCATCTTCGAGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGATCTGGTGGA 388 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| |||||||| || ||||| || || |||||||||| || | ||| ||| Sbjct 387 ATGCCTTCCTTATCCTGAATCTTCGCCTTGACATTTTCTATAGTGTCTGAGGCTTCAACT 328 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || ||||| || || || ||||| || ||||||||||| Sbjct 327 TCCAATGTTATGGTCTTGCCTGTGAGGGTCTTTACAAATATCTGCAT 281 >seq440555 Length=12508 Score = 118 bits (130), Expect = 2e-21 Identities = 167/232 (72%), Gaps = 11/232 (5%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| |||||||| || | ||| | || |||||| ||||||||||| || | Sbjct 328 TCCACCACGGAGTCTTCTTAACACATGTAAAGTAGATTCTTTCTGGATATTATAATCAGA 387 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || || || |||||||| || || || | || ||| ||| ||| ||||| Sbjct 388 CAATGTTCGGCCATCTTCTAAGTGCTTGCCAGAAAA-ATCT----CTGCTGA---TCTGG 439 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | ||||||||||| ||||||||||| ||||| || ||||| || ||| | ||| Sbjct 440 GGGAATTCCTTCTTTTTCCTGGATTTTGGCTTTAACATTTTCAATTTTATCCGAAGCTTC 499 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || | ||||| |||||||| |||| |||||| || ||||||||||| Sbjct 500 TACCTCTAAGGTGATAGTCTTCCCCGTCAAAGTCTTCACATATATCTGCATT 551 >seq302911 Length=9965 Score = 109 bits (120), Expect = 1e-18 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 ||||||| || || || || | | ||||| || ||||| | ||||| || || || | Sbjct 1226 CTTTTTGTATGTTGTAATCTGACAAAGTGCGACCATCTTCCAGCTGTTTGCCAGCAAATA 1285 Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403 |||||||||| ||| | ||| || |||||||| || || || || ||||| || |||| Sbjct 1286 TCAGACGCTGCTGATCAGGTGGAATACCTTCTTTGTCTTGAATCTTTGCTTTAACATTTT 1345 Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 | || | ||| | ||| ||||| | || || |||||||| || | ||||| |||| Sbjct 1346 CAATTGTATCTGAAGGTTCAACTTCCAATGTTATTGTCTTCCCCGTTAATGTCTTCACGA 1405 Query 288464 ATATCTGCAT 288473 | |||||||| Sbjct 1406 AGATCTGCAT 1415 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||| || ||||| || || | || || ||||| ||||| || ||||| ||||| || | Sbjct 824 CTTTCTGTATATTGTAATCTGACAGAGTCCGTCCATCTTCCAACTGTTTCCCTGCAAAAA 883 Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403 | || | ||| || ||| || |||||||||||||| || || ||||| || |||| Sbjct 884 TTAGCCTCTGCTGGTCTGGTGGAATGCCTTCTTTATCCTGAATCTTTGCTTTGACATTTT 943 Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 |||| | || || || ||||| | || || || || || |||| || || || | Sbjct 944 CTATTGTGTCTGACGGCTCAACTTCTAATGTTATTGTTTTGCCAGTCAACGTTTTCACAA 1003 Query 288464 ATATCTGCATT 288474 |||| |||||| Sbjct 1004 ATATTTGCATT 1014 >seq31008 Length=30129 Score = 102 bits (112), Expect = 2e-16 Identities = 101/129 (78%), Gaps = 4/129 (3%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 |||||||||||||||||||| ||||| || ||||| || | ||| | |||||| || Sbjct 24902 CCTTCTTTATCCTGGATTTTGGCTTTAACATTTTCAATTGTATCCGAAGCTTCTACCTCT 24961 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATTCT---AA 288486 | ||||| |||||||| |||| |||||| || |||||||||||| || | |||| || Sbjct 24962 AAGGTGATAGTCTTCCCCGTCAAAGTCTTCACAAATATCTGCATTTTGAT-TTCTGTAAA 25020 Query 288487 TATTTTTAA 288495 | |||||| Sbjct 25021 AAGTTTTAA 25029 >seq29170 Length=5657 Score = 87.8 bits (96), Expect = 4e-12 Identities = 151/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 |||||| || | |||| | || |||||| || |||||||| || | || | ||| | Sbjct 1474 TCTAAGCACCAAGTGAAGGGGGCATTCTTTCTGAATATTATATTCAGAAAGTATACGTTC 1533 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTC 288374 |||| | ||||| |||| ||||| || ||||||| | ||||| || ||| | Sbjct 1534 AACTTCCAGCTGTTTGTCTGCAAAGATGAGTCGCTGTTTA---TCTGGCGGAATGCCTCC 1590 Query 288375 TTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGT 288434 | ||| ||||| ||||| ||||| || || | | ||| | ||| || || || || Sbjct 1591 CTCATCTTGGATCTTCGCATTCACATTCTCAACGGTGTCGGAAGCTTCCACCTCAAGAGT 1650 Query 288435 GATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCA 288472 || ||||||||||| || ||||| || || | |||| Sbjct 1651 AATGGTCTTCCCGGTAAGGGTCTTCACAAAAAGTTGCA 1688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158532255919576