Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq741633 154 3e-32
seq708045 152 1e-31
seq302910 149 1e-30
seq831174 140 8e-28
seq303400 132 1e-25
seq1341392 122 2e-22
seq440555 118 2e-21
seq302911 109 1e-18
seq31008 102 2e-16
seq29170 87.8 4e-12
>seq741633
Length=11487
Score = 154 bits (170), Expect = 3e-32
Identities = 164/215 (76%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321
|| || | ||||| ||| |||||| || ||||||||||| | || || ||||| |||
Sbjct 11359 AGCACCAAATGAAGAGTGGATTCTTTCTGAATATTATAGTCCGAAAGTGTACGTCCATCT 11300
Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTA 288378
|| || ||||| ||||| ||||| || ||||||||| |||||| || ||||| |||
Sbjct 11299 TCCAACTGTTTGCCTGCAAAGATGAGTCGCTGTTGA---TCTGGGGGAATGCCTTCCTTA 11243
Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438
|| ||||||||||| ||||| || || || | ||| | ||| || || || || ||
Sbjct 11242 TCTTGGATTTTCGCCTTCACATTCTCAATTGTGTCGGAAGCTTCCACCTCCAGAGTAATG 11183
Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||||||||| |||||||| || || ||||||||
Sbjct 11182 GTCTTCCCGGTAAGAGTCTTCACAAAAATCTGCAT 11148
Score = 122 bits (134), Expect = 2e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | | ||| ||||| | ||| | || ||| || || || || || || |
Sbjct 8125 CCACCTCTCAATCTTAGTACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGAC 8066
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || ||||| | ||| || |||||||||||||| | |||||| |||
Sbjct 8065 AGTGTACGACCATCTTCGAGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGGTCTGGTGGA 8006
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| |||||||| || || ||||| || ||||| || | || | ||||||
Sbjct 8005 ATACCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCTGATGCCTCTACT 7946
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| ||||| || ||||| ||||| ||||| ||||||||
Sbjct 7945 TCAAGGGTGATTGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 7899
Score = 120 bits (132), Expect = 7e-22
Identities = 169/235 (72%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| || | || || || ||||| | ||| ||||| || ||||| ||||
Sbjct 10010 CATG-CCACCTCGCAACCTTAGCACCAGATGCAAAGTGGACTCTTTCTGAATATTGTAGT 9952
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | || || ||||| ||||| | || || || || ||||| ||||| || || |
Sbjct 9951 CAGATAGGGTCCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGG---T 9895
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
|||| || ||||||||||||||||| ||||||||||| ||||| || | || |
Sbjct 9894 CTGGAGGAATACCTTCTTTATCCTGGATCTTCGCTTTCACATTTTCGATGGTGTCTGAAG 9835
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||| ||||| || || || || || || || || ||||| || || ||||||||
Sbjct 9834 CTTCCACTTCCAGGGTAATGGTTTTTCCAGTAAGTGTCTTCACAAAGATCTGCAT 9780
Score = 116 bits (128), Expect = 9e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || || ||||| || || | || || | || ||||| | |||||| || || ||
Sbjct 8318 TTCCTTCTGAATATTGTAATCAGATAGAGTTCTCCCATCTTCGAGTTGTTTGCCAGCAAA 8259
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||| | ||| ||| | |||||| ||||| |||||||| |||||||| ||||| ||
Sbjct 8258 AATCAGTCTCTGCTGATCAGGTGGGATCCCTTCCTTATCCTGAATTTTCGCCTTCACATT 8199
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | ||| | |||||||| | ||||| || || || || || ||||| ||
Sbjct 8198 CTCAATTGTATCAGATGCCTCTACTTCCAATGTGATGGTTTTACCAGTTAGTGTCTTAAC 8139
Query 288462 GAATATCTGCAT 288473
||||||||||||
Sbjct 8138 GAATATCTGCAT 8127
Score = 114 bits (126), Expect = 3e-20
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || | || || || ||||| | || ||| || || |||||||| || |
Sbjct 10234 CCACCACGCAACCTCAGGACAAGATGCAGAGTAGATTCCTTCTGAATATTATAATCAGAC 10175
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || || || ||||| | || |||||||| ||||||| | ||| || |||||
Sbjct 10174 AAGGTCCGCCCATCTTCCAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGG---TCTGGC 10118
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| ||||||||||||||||| |||||||| || || ||||| | |||| | ||||
Sbjct 10117 GGAATGCCTTCTTTATCCTGGATCTTCGCTTTTACATTCTCTATGGTATCGGATGCTTCT 10058
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| | || || || || || |||| || || || |||||||||||
Sbjct 10057 ACTTCTAATGTAATAGTTTTTCCAGTCAAGGTTTTCACAAATATCTGCAT 10008
Score = 109 bits (120), Expect = 1e-18
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315
|| ||||| || || |||| || ||||| || || || || || | | |||||
Sbjct 9085 AGCCTAAGAACCAGGTGAAGTGTAGACTCTTTCTGAATGTTGTAATCTGACAAAGTGCGG 9026
Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375
|| ||||| | ||||||||||| || |||| | |||||| ||| || |||||
Sbjct 9025 CCATCTTCAAGCTGTTTTCCTGCAAAAATCAATCTCTGTTGGTCTGGTGGTATACCTTCC 8966
Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435
|| |||||||| || || |||||||| ||||| | || | || |||||||| ||
Sbjct 8965 TTGTCCTGGATCTTTGCCTTCACGTTCTCTATGGTGTCTGATGCCTCCACTTCGAGTGTT 8906
Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||||||||| || || ||||||||
Sbjct 8905 ATAGTTTTGCCAGTCAGAGTCTTTACAAAGATCTGCAT 8868
Score = 107 bits (118), Expect = 4e-18
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| | || || || || | ||| | || ||| |||||||| || || || |
Sbjct 10463 TCCACCTCTTAGCCTCAGAACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAATCTGA 10404
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363
| || | ||| ||||| || ||||||||||| ||||| || |||||||| ||||
Sbjct 10403 TAAGGTCCTTCCATCTTCCAACTGTTTTCCTGCAAAGATGAGTCGCTGTTG---ATCTGG 10347
Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
|| || ||||| || || ||||| || ||||| || || || || | || | |||
Sbjct 10346 AGGAATGCCTTCCTTGTCTTGGATCTTTGCTTTGACATTCTCAATGGTGTCAGAAGCTTC 10287
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || || ||||| || || |||||||| || || ||||||||
Sbjct 10286 CACCTCCAGAGTAATTGTCTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 10236
Score = 104 bits (114), Expect = 5e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || || ||||| || || | || ||||| || ||||| | || || || || ||
Sbjct 8831 TTCCTTCTGAATATTGTAATCAGACAGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAA 8772
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|| ||||| || || ||| ||||||||||| |||||||| || || ||||| ||
Sbjct 8771 AATGAGACGTTGCTGGTCTGGTGGAATTCCTTCTTTGTCCTGGATCTTTGCCTTCACATT 8712
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| || | || | ||| ||||| || ||||| ||||| || || || ||||| ||
Sbjct 8711 TTCAATTGTGTCTGAAGCTTCCACTTCCAGTGTGATGGTCTTGCCTGTGAGGGTCTTTAC 8652
Query 288462 GAATATCTGCAT 288473
|| ||||||||
Sbjct 8651 AAAAATCTGCAT 8640
Score = 84.2 bits (92), Expect = 5e-11
Identities = 158/231 (68%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || || || || || || | ||| | ||| ||| || || || || || || |
Sbjct 10690 CCTCCACGCAGCCTCAGCACTAAATGCAAAGTGGATTCCTTCTGAATGTTGTAATCAGAT 10631
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365
| || | ||| ||||| | || || || || ||||| ||||||||||| |||||
Sbjct 10630 AAGGTCCTTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGG---TCTGGA 10574
Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||| ||||||||||| || || || |||||||| ||||| || | || | ||
Sbjct 10573 GGGATGCCTTCTTTATCTTGAATCTTAGCTTTCACATTTTCAATTGTGTCAGATGCCTCA 10514
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||||| | || || || || || || || ||||| || || || ||||||
Sbjct 10513 ACTTCCAATGTAATTGTTTTGCCAGTAAGTGTCTTCACAAAAATTTGCATT 10463
>seq708045
Length=25632
Score = 152 bits (168), Expect = 1e-31
Identities = 183/246 (74%), Gaps = 7/246 (3%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| |||||||| | || || || | || |||||| ||||||||||| || |
Sbjct 10618 TCCACCACGGAGTCTTAACACAAGGTGTAAAGTAGATTCTTTCTGGATATTATAATCAGA 10559
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| || || || ||||| || || || || || || ||||| | ||| ||| || ||
Sbjct 10558 CAATGTTCGGCCATCTTCCAACTGCTTGCCAGCAAATATCAGTCTCTGCTGA---TCCGG 10502
Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
| ||||||||||||||||||||||| ||||| || ||||| || | ||| | |||
Sbjct 10501 GGGAATTCCTTCTTTATCCTGGATTTTGGCTTTAACATTTTCAATTGTATCCGAAGCTTC 10442
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATT 288482
||| || | ||||| |||||||| |||| |||||| || |||||||||||| || | ||
Sbjct 10441 TACCTCTAAGGTGATAGTCTTCCCCGTCAAAGTCTTCACAAATATCTGCATTTTGAT-TT 10383
Query 288483 CTAATA 288488
|| |||
Sbjct 10382 CTTATA 10377
>seq302910
Length=12142
Score = 149 bits (164), Expect = 1e-30
Identities = 147/190 (77%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343
||||||||||||| || || | ||| || || || ||||||| |||||| ||||||||||
Sbjct 4320 CTTTTTGGATATTGTAATCTGAGAGGGTACGACCATCTTCTAGTTGTTTCCCTGCGAAGA 4379
Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403
| || | ||||||| | |||||| |||||||||||||||||||| || || || ||||
Sbjct 4380 TGAGCCTCTGTTGATCAGGTGGGATCCCTTCTTTATCCTGGATTTTTGCCTTAACATTTT 4439
Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
|||| | ||| | ||| ||||| || || || || || || || ||||| || || |
Sbjct 4440 CTATGGTATCTGATGGTTCCACTTCCAGAGTTATTGTTTTACCAGTGAGAGTTTTCACAA 4499
Query 288464 ATATCTGCAT 288473
| || |||||
Sbjct 4500 AAATTTGCAT 4509
Score = 116 bits (128), Expect = 9e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || || || || | ||| | ||| ||||| || ||||| ||||| |
Sbjct 3966 CCACCACGAAGCCTTAGAACCAAATGTAATGTGGACTCTTTCTGAATATTGTAGTCAGAT 4025
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || || || ||||| ||||||||||| || || || || | ||| || |||
Sbjct 4026 AAAGTACGCCCATCTTCCAATTGTTTTCCAGCAAAAATAAGCCTCTGCTGGTCTGGTGGA 4085
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
||||||||||| || |||||||| || ||||| ||||| |||| ||| | ||| |||
Sbjct 4086 ATTCCTTCTTTGTCTTGGATTTTGGCCTTCACATTTTCAATAGTATCTGATGGTTCAACT 4145
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || || || || || | |||||||| || || |||||
Sbjct 4146 TCCAGTGTTATTGTTTTACCTGTTAATGTCTTGACAAAAATTTGCAT 4192
Score = 102 bits (112), Expect = 2e-16
Identities = 139/193 (72%), Gaps = 6/193 (3%)
Strand=Plus/Plus
Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343
||||||| || || || || | ||| || | ||| || || | |||||| || || ||||
Sbjct 11150 CTTTTTGTATGTTGTAATCTGAGAGAGTTCTTCCATCCTCAAGTTGTTTACCAGCAAAGA 11209
Query 288344 TCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGT 288400
| | ||||||||| ||||| ||||||||||| || || ||||| ||||| || |
Sbjct 11210 TTAATCGCTGTTGA---TCTGGCGGTATTCCTTCTTTGTCTTGAATTTTTGCTTTTACAT 11266
Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460
|||| || | || | || ||||| | || || || ||||| |||||||| || |
Sbjct 11267 TTTCAATTGTGTCTGATGGCTCAACTTCCAATGTTATTGTTTTCCCTGTCAGAGTTTTTA 11326
Query 288461 CGAATATCTGCAT 288473
| || ||||||||
Sbjct 11327 CAAAAATCTGCAT 11339
>seq831174
Length=18794
Score = 140 bits (154), Expect = 8e-28
Identities = 181/246 (74%), Gaps = 7/246 (3%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| |||||||| | || || || | || || ||| ||||||||||| || |
Sbjct 4338 TCCACCACGGAGTCTCAACACAAGGTGTAAAGTAGATTATTTCTGGATATTATAATCAGA 4279
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATC--T 288363
| || || || ||||| || || || || || || ||||| | ||| ||| || |
Sbjct 4278 CAATGTTCGGCCATCTTCCAACTGCTTGCCAGCAAATATCAGTCTCTGCTGA---TCCGT 4222
Query 288364 GGGA-TTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
|||| |||||||||||||||||||||| || || || ||||| || | ||| | |||
Sbjct 4221 GGGAATTCCTTCTTTATCCTGGATTTTGGCATTAACATTTTCAATTGTATCCGAAGCTTC 4162
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATT 288482
||| || | ||||| |||||||| |||| | |||| || |||||||||||| || | ||
Sbjct 4161 TACCTCTAAGGTGATAGTCTTCCCCGTCAAATTCTTCACAAATATCTGCATTTTGAT-TT 4103
Query 288483 CTAATA 288488
|| |||
Sbjct 4102 CTTATA 4097
>seq303400
Length=5017
Score = 132 bits (146), Expect = 1e-25
Identities = 156/207 (75%), Gaps = 7/207 (3%)
Strand=Plus/Minus
Query 288285 TTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGAT 288344
||| ||||||||||| || | | || || || ||||| || || || || || || ||
Sbjct 5017 TTTCTGGATATTATAATCAGACAATGTTCGGCCATCTTCCAACTGCTTGCCAGCAAATAT 4958
Query 288345 CAGACGCTGTTGAGAATC--TGGGA-TTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| | ||| ||| || ||||| |||||||||||||||||||||| ||||| || ||
Sbjct 4957 CAGTCTCTGCTGA---TCCGTGGGAATTCCTTCTTTATCCTGGATTTTGGCTTTAACATT 4901
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| || | ||| | |||||| || | ||||| ||||| || |||| |||||| ||
Sbjct 4900 TTCAATTGTATCCGAAGCTTCTACCTCTAAGGTGATAGTCTTTCCCGTCAAAGTCTTCAC 4841
Query 288462 GAATATCTGCATTATGTTATTCTAATA 288488
|||||||||||| || | |||| |||
Sbjct 4840 AAATATCTGCATTTTGAT-TTCTTATA 4815
>seq1341392
Length=603
Score = 122 bits (134), Expect = 2e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | | ||| ||||| | ||| | || ||| || || || || || || |
Sbjct 507 CCACCTCTCAATCTTAGTACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGAC 448
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || ||||| | ||| || |||||||||||||| | ||||||| |||
Sbjct 447 AGTGTACGACCATCTTCGAGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGATCTGGTGGA 388
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| |||||||| || ||||| || || |||||||||| || | ||| |||
Sbjct 387 ATGCCTTCCTTATCCTGAATCTTCGCCTTGACATTTTCTATAGTGTCTGAGGCTTCAACT 328
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | || || ||||| || || || ||||| || |||||||||||
Sbjct 327 TCCAATGTTATGGTCTTGCCTGTGAGGGTCTTTACAAATATCTGCAT 281
>seq440555
Length=12508
Score = 118 bits (130), Expect = 2e-21
Identities = 167/232 (72%), Gaps = 11/232 (5%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| |||||||| || | ||| | || |||||| ||||||||||| || |
Sbjct 328 TCCACCACGGAGTCTTCTTAACACATGTAAAGTAGATTCTTTCTGGATATTATAATCAGA 387
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| || || || |||||||| || || || | || ||| ||| ||| |||||
Sbjct 388 CAATGTTCGGCCATCTTCTAAGTGCTTGCCAGAAAA-ATCT----CTGCTGA---TCTGG 439
Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
| ||||||||||| ||||||||||| ||||| || ||||| || ||| | |||
Sbjct 440 GGGAATTCCTTCTTTTTCCTGGATTTTGGCTTTAACATTTTCAATTTTATCCGAAGCTTC 499
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||| || | ||||| |||||||| |||| |||||| || |||||||||||
Sbjct 500 TACCTCTAAGGTGATAGTCTTCCCCGTCAAAGTCTTCACATATATCTGCATT 551
>seq302911
Length=9965
Score = 109 bits (120), Expect = 1e-18
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343
||||||| || || || || | | ||||| || ||||| | ||||| || || || |
Sbjct 1226 CTTTTTGTATGTTGTAATCTGACAAAGTGCGACCATCTTCCAGCTGTTTGCCAGCAAATA 1285
Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403
|||||||||| ||| | ||| || |||||||| || || || || ||||| || ||||
Sbjct 1286 TCAGACGCTGCTGATCAGGTGGAATACCTTCTTTGTCTTGAATCTTTGCTTTAACATTTT 1345
Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
| || | ||| | ||| ||||| | || || |||||||| || | ||||| ||||
Sbjct 1346 CAATTGTATCTGAAGGTTCAACTTCCAATGTTATTGTCTTCCCCGTTAATGTCTTCACGA 1405
Query 288464 ATATCTGCAT 288473
| ||||||||
Sbjct 1406 AGATCTGCAT 1415
Score = 96.9 bits (106), Expect = 8e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343
|||| || ||||| || || | || || ||||| ||||| || ||||| ||||| || |
Sbjct 824 CTTTCTGTATATTGTAATCTGACAGAGTCCGTCCATCTTCCAACTGTTTCCCTGCAAAAA 883
Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403
| || | ||| || ||| || |||||||||||||| || || ||||| || ||||
Sbjct 884 TTAGCCTCTGCTGGTCTGGTGGAATGCCTTCTTTATCCTGAATCTTTGCTTTGACATTTT 943
Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
|||| | || || || ||||| | || || || || || |||| || || || |
Sbjct 944 CTATTGTGTCTGACGGCTCAACTTCTAATGTTATTGTTTTGCCAGTCAACGTTTTCACAA 1003
Query 288464 ATATCTGCATT 288474
|||| ||||||
Sbjct 1004 ATATTTGCATT 1014
>seq31008
Length=30129
Score = 102 bits (112), Expect = 2e-16
Identities = 101/129 (78%), Gaps = 4/129 (3%)
Strand=Plus/Plus
Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429
|||||||||||||||||||| ||||| || ||||| || | ||| | |||||| ||
Sbjct 24902 CCTTCTTTATCCTGGATTTTGGCTTTAACATTTTCAATTGTATCCGAAGCTTCTACCTCT 24961
Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATTCT---AA 288486
| ||||| |||||||| |||| |||||| || |||||||||||| || | |||| ||
Sbjct 24962 AAGGTGATAGTCTTCCCCGTCAAAGTCTTCACAAATATCTGCATTTTGAT-TTCTGTAAA 25020
Query 288487 TATTTTTAA 288495
| ||||||
Sbjct 25021 AAGTTTTAA 25029
>seq29170
Length=5657
Score = 87.8 bits (96), Expect = 4e-12
Identities = 151/218 (69%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317
|||||| || | |||| | || |||||| || |||||||| || | || | ||| |
Sbjct 1474 TCTAAGCACCAAGTGAAGGGGGCATTCTTTCTGAATATTATATTCAGAAAGTATACGTTC 1533
Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTC 288374
|||| | ||||| |||| ||||| || ||||||| | ||||| || ||| |
Sbjct 1534 AACTTCCAGCTGTTTGTCTGCAAAGATGAGTCGCTGTTTA---TCTGGCGGAATGCCTCC 1590
Query 288375 TTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGT 288434
| ||| ||||| ||||| ||||| || || | | ||| | ||| || || || ||
Sbjct 1591 CTCATCTTGGATCTTCGCATTCACATTCTCAACGGTGTCGGAAGCTTCCACCTCAAGAGT 1650
Query 288435 GATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCA 288472
|| ||||||||||| || ||||| || || | ||||
Sbjct 1651 AATGGTCTTCCCGGTAAGGGTCTTCACAAAAAGTTGCA 1688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158532255919576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |