Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_011335.1
Length=119343
Score E
Sequences producing significant alignments: (Bits) Value
seq856439 105 5e-18
seq399305 105 5e-18
seq17376 98.7 7e-16
seq767331 96.9 3e-15
seq193865 96.9 3e-15
seq26530 95.1 9e-15
seq1320977 84.2 2e-11
>seq856439
Length=3663
Score = 105 bits (116), Expect = 5e-18
Identities = 105/132 (80%), Gaps = 3/132 (2%)
Strand=Plus/Minus
Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACA-CGACGGCCGACCCACACAA 108524
||||||| ||| ||| | |||||||||||| |||| |||| |||||||| |||||
Sbjct 3242 TGGGTGCGCGACCACCGCCAGCACCACAAGTACAGCGACACCGAC-GCCGACCCCCACAA 3184
Query 108525 CGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGA 108584
||||| |||||| |||| ||||||||| | || ||||||||| || |||| |||||||
Sbjct 3183 CGCCACCAGGGGCTTCTTCTTCTCGCACATCGGCTGGCTCATGGTGCGCAAGCACCCCGA 3124
Query 108585 CGTGATCTCGGC 108596
|| ||| ||||
Sbjct 3123 GGTCATC-CGGC 3113
>seq399305
Length=2281
Score = 105 bits (116), Expect = 5e-18
Identities = 105/132 (80%), Gaps = 3/132 (2%)
Strand=Plus/Plus
Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACA-CGACGGCCGACCCACACAA 108524
||||||| ||| ||| | |||||||||||| |||| |||| |||||||| |||||
Sbjct 653 TGGGTGCGCGACCACCGCCAGCACCACAAGTACAGCGACACCGAC-GCCGACCCCCACAA 711
Query 108525 CGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGA 108584
||||| |||||| |||| ||||||||| | || ||||||||| || |||| |||||||
Sbjct 712 CGCCACCAGGGGCTTCTTCTTCTCGCACATCGGCTGGCTCATGGTGCGCAAGCACCCCGA 771
Query 108585 CGTGATCTCGGC 108596
|| ||| ||||
Sbjct 772 GGTCATC-CGGC 782
>seq17376
Length=920
Score = 98.7 bits (108), Expect = 7e-16
Identities = 71/82 (87%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 108869 TGGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACG 108928
||||| ||| | ||| || |||||||| |||||||||||||||||||||||||||| |
Sbjct 420 TGGTGTCGGTGGCGGCGCTGGGCGAGGGCTGGCACAACTACCACCACGTGTTCCCCTGGG 361
Query 108929 ACTACAAGGCCGCCGAGTTGGG 108950
|||||||||| |||||| ||||
Sbjct 360 ACTACAAGGCGGCCGAGCTGGG 339
>seq767331
Length=4460
Score = 96.9 bits (106), Expect = 3e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525
||||||| ||| ||| | || |||||||||| | || ||| |||||||| ||||||
Sbjct 4018 TGGGTGCGCGACCACCGCGTGCACCACAAGTTCAGCGAGACGGACGCCGACCCGCACAAC 4077
Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585
|| | | || |||| ||| |||||||||| |||||||||||| |||| |||||||
Sbjct 4078 GCGCGCCGCGGCTTCTTCTTCGCGCACGTGGGCTGGCTCATGATGCGCAAGCACCCCGAG 4137
Query 108586 GTGATC 108591
|| |||
Sbjct 4138 GTCATC 4143
>seq193865
Length=1712
Score = 96.9 bits (106), Expect = 3e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525
||||||| ||| ||| | || |||||||||| | || ||| |||||||| ||||||
Sbjct 849 TGGGTGCGCGACCACCGCGTGCACCACAAGTTCAGCGAGACGGACGCCGACCCGCACAAC 790
Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585
|| | | || |||| ||| |||||||||| |||||||||||| |||| |||||||
Sbjct 789 GCGCGCCGCGGCTTCTTCTTCGCGCACGTGGGCTGGCTCATGATGCGCAAGCACCCCGAG 730
Query 108586 GTGATC 108591
|| |||
Sbjct 729 GTCATC 724
>seq26530
Length=16574
Score = 95.1 bits (104), Expect = 9e-15
Identities = 73/87 (84%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 108871 GTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGAC 108930
||||| | | |||| |||||||||| |||||||||||||||||||| ||||| | |||
Sbjct 1575 GTGGCAGTGGTGGCGTTCGGCGAGGGCTGGCACAACTACCACCACGTCTTCCCGTGGGAC 1634
Query 108931 TACAAGGCCGCCGAGTTGGGGAACGAC 108957
|||||||| |||||| |||| ||| ||
Sbjct 1635 TACAAGGCGGCCGAGCTGGGCAACTAC 1661
>seq1320977
Length=497
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 108877 GCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAG 108936
||| ||| ||| |||||||| |||||||||| ||||||| ||||||| ||||||||||
Sbjct 272 GCGCTGGGTCTGGGCGAGGGCTGGCACAACTTCCACCACACGTTCCCCAGCGACTACAAG 331
Query 108937 GCCGCCGAGTTGGG 108950
|| |||||| ||||
Sbjct 332 GCGGCCGAGCTGGG 345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 375270470962848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |