Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq302910 123 2e-23 seq741633 107 2e-18 seq1341392 84.2 2e-11 >seq302910 Length=12142 Score = 123 bits (136), Expect = 2e-23 Identities = 143/190 (75%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 138427 TTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATT 138486 ||||| |||||||| || | ||| | ||||| ||||||||||| | | ||||| Sbjct 11152 TTTTGTATGTTGTAATCTGAGAGAGTTCTTCCATCCTCAAGTTGTTTACCAGCAAAGATT 11211 Query 138487 AGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTC 138545 | |||||||| || || ||||| ||||||||||| ||| |||||| ||||| | ||| Sbjct 11212 AATCGCTGTTGATCTGGCGGTATTCCTTCTTTGTC-TTGAATTTTTGCTTTTACATTTTC 11270 Query 138546 CACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAA 138605 | ||||| | | ||| || || | || | ||||| || ||||||||||||||||| Sbjct 11271 AATTGTGTCTGATGGCTCAACTTCCAATGTTATTGTTTTCCCTGTCAGAGTTTTTACAAA 11330 Query 138606 AATCTGCATG 138615 |||||||||| Sbjct 11331 AATCTGCATG 11340 Score = 82.4 bits (90), Expect = 7e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 138427 TTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATT 138486 ||||| || ||||| || | ||||| || || |||||||| || | |||| Sbjct 4322 TTTTGGATATTGTAATCTGAGAGGGTACGACCATCTTCTAGTTGTTTCCCTGCGAAGATG 4381 Query 138487 AGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCC 138546 || | |||||| || || || || |||||||| || ||||||| || | | ||| Sbjct 4382 AGCCTCTGTTGATCAGGTGGGATCCCTTCTTTATCCTGGATTTTTGCCTTAACATTTTCT 4441 Query 138547 ACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606 | ||| || | | ||||| || | || | ||||||||||| |||||||| |||||| Sbjct 4442 ATGGTATCTGATGGTTCCACTTCCAGAGTTATTGTTTTACCAGTGAGAGTTTTCACAAAA 4501 Query 138607 ATCTGCAT 138614 || ||||| Sbjct 4502 ATTTGCAT 4509 >seq741633 Length=11487 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || ||||||||||| || || ||| || || || || ||||| || | | Sbjct 9061 GACTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCAAGCTGTTTTCCTGCA 9002 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || | | ||||||||| || ||||||||||| ||||| ||| ||| || | Sbjct 9001 AAAATCAATCTCTGTTGGTCTGGTGGTATACCTTCCTTGTCCTGGATCTTTGCCTTCACG 8942 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | |||||| |||| || | ||||| ||||||||||| ||| Sbjct 8941 TTCTCTATGGTGTCTGATGCCTCCACTTCGAGTGTTATAGTTTTGCCAGTCAGAGTCTTT 8882 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 8881 ACAAAGATCTGCAT 8868 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||||||||| || || || || || || ||||| ||||| | | Sbjct 9745 GATTCCTTCTGAATGTTGTAATCCGACAGGGTTCGTCCATCTTCCAGTTGCTTACCAGCA 9686 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| ||||| || ||||| ||||| ||| ||| || | Sbjct 9685 AAGATGAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACA 9626 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | ||| | ||||| | | || ||||| | || | || || ||||| || || || Sbjct 9625 TTTTCAATAGTGTCTGAAGCTTCTACCTCCAGGGTAATTGTCTTGCCAGTAAGGGTCTTC 9566 Query 138601 ACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 9565 ACAAAAATCTGCAT 9552 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 || ||||||| | || || || || || |||||||| | ||| || ||||| Sbjct 9304 ACCAAATGTAGTGTAGATTCTTTCTGGATATTGTAGTCTGAAAGAGTGCGGCCATCCTCA 9245 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 |||||||| || | | | || | | ||| ||||| || || || ||||| || || || Sbjct 9244 AGTTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGTGGGATGCCTTCCTTATCT-TG 9186 Query 138526 ATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 | |||||| ||||| | || | ||||| | | || ||||| | || | ||||| Sbjct 9185 AATTTTTGCTTTTACATTCTCAATAGTGTCAGATGCTTCAACCTCTAATGTTATGGTTTT 9126 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 || || |||||||||||||||||||||||| || Sbjct 9125 CCCTGTAAGAGTTTTTACAAAAATCTGCATGCCT 9092 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | | || ||||| | | | || ||||| ||||||||||| || | Sbjct 8125 CCACCTCTCAATCTTAGTACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGAC 8066 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || |||||||| || || | |||| || | ||||||||| || || Sbjct 8065 AGTGTACGACCATCTTCGAGTTGCTTCCCTGCGAAGATCAGCCTCTGTTGGTCTGGTGGA 8006 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| || || ||| | || | ||| | | ||| | |||||| | | ||| || Sbjct 8005 ATACCTTCCTTATC-CTGAATCTTGGCTTTGACATTTTCAATGGTGTCTGATGCCTCTAC 7947 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || |||||||| || || || || |||||||| Sbjct 7946 TTCAAGGGTGATTGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 7899 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||||||| | ||| || | ||| | | || ||||| ||||| ||||| || | Sbjct 8866 CCTCCTCGCAACCTCAACACCAGATGGAGAGTCGATTCCTTCTGAATATTGTAATCAGAC 8807 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || || || || || ||||| | | | || ||||| || ||||| || || Sbjct 8806 AGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATGAGACGTTGCTGGTCTGGTGGA 8747 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| ||| ||| || | | ||| | ||||| | | ||||| Sbjct 8746 ATTCCTTCTTTGTCCTGGATCTTTGCCTTCACATTTTCAATTGTGTCTGAAGCTTCCACT 8687 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || || || ||||||||||||||||| Sbjct 8686 TCCAGTGTGATGGTCTTGCCTGTGAGGGTCTTTACAAAAATCTGCAT 8640 Score = 89.7 bits (98), Expect = 5e-13 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATA--GTACGCGAG 138459 || ||| ||||| | | || |||||||| |||||||| || | ||| || | Sbjct 10448 CAGAACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAATC--TGATAAGGTCCTTCCA 10391 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 || || | ||||| || | | |||| || |||||||| || ||||| || ||||| ||| Sbjct 10390 TCTTCCAACTGTTTTCCTGCAAAGATGAGTCGCTGTTGATCTGGAGGAATGCCTTCCTTG 10331 Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 || ||| ||| ||| | | || | |||||| | | |||||||| | || | Sbjct 10330 TCTTGGATCTTTGCTTTGACATTCTCAATGGTGTCAGAAGCTTCCACCTCCAGAGTAATT 10271 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || ||||| ||||| || |||||||||||||| Sbjct 10270 GTCTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 10236 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||||||| | | || | ||| | | ||||| || ||||| |||||||| Sbjct 10007 GCCACCTCGCAACCTTAGCACCAGATGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGA 9948 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || || || || || | | |||| ||||| || ||||| ||||| Sbjct 9947 TAGGGTCCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCTGGAGG 9888 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||||||||| || ||| || ||| | | ||| | |||||| | | ||||| Sbjct 9887 AATACCTTCTTTATCCTGGATCTTCGCTTTCACATTTTCGATGGTGTCTGAAGCTTCCAC 9828 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||| || || || ||||| |||||||| Sbjct 9827 TTCCAGGGTAATGGTTTTTCCAGTAAGTGTCTTCACAAAGATCTGCAT 9780 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| | || |||||||| | | || ||||| ||||||||||| || Sbjct 10690 CCTCCACGCAGCCTCAGCACTAAATGCAAAGTGGATTCCTTCTGAATGTTGTAATCAGAT 10631 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || || || || || || | | |||| |||||||||||||| ||||| Sbjct 10630 AAGGTCCTTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGAGGG 10571 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || |||||||| || ||| | || | ||| | | ||| | ||||| | | ||| || Sbjct 10570 ATGCCTTCTTTATC-TTGAATCTTAGCTTTCACATTTTCAATTGTGTCAGATGCCTCAAC 10512 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||| || || || |||||||| ||||| Sbjct 10511 TTCCAATGTAATTGTTTTGCCAGTAAGTGTCTTCACAAAAATTTGCAT 10464 >seq1341392 Length=603 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||||||||| |||||||| || || || || || || || || || | | Sbjct 246 GACTCCTTTTGAATATTGTAGTCAGACAATGTGCGGCCATCTTCCAGCTGCTTTCCAGCA 187 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 |||| || | ||||||||| || || |||||||| || || ||| | || | ||| | Sbjct 186 AAGATCAGCCTCTGTTGGTCTGGTGGAATACCTTCCTTATC-CTGAATCTTGGCTTTGAC 128 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | ||| | |||||| | | ||| || || | || | || || |||||||| || || Sbjct 127 ATTTTCAATGGTGTCTGATGCCTCTACTTCAAGGGTGATTGTCTTGCCAGTCAGGGTCTT 68 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 67 CACGAAGATCTGCAT 53 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487593365826240