Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq741633 131 2e-25
seq302910 105 6e-18
seq1341392 98.7 9e-16
>seq741633
Length=11487
Score = 131 bits (144), Expect = 2e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
||||||||||| ||||| |||||||| || ||||| ||| || |||||||||||
Sbjct 9064 GTAGACTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCAAGCTGTTTTCCT 9005
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| | ||||||| ||| || || || ||||| || ||||||||| ||| || |||
Sbjct 9004 GCAAAAATCAATCTCTGTTGGTCTGGTGGTATACCTTCCTTGTCCTGGATCTTTGCCTTC 8945
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| ||||||| || | |||||||| ||||||||
Sbjct 8944 ACGTTCTCTATGGTGTCTGATGCCTCCACTTCGAGTGTTATAGTTTTGCCAGTCAGAGTC 8885
Query 127097 TTTACAAAAATCTGCAT 127113
|||||||| ||||||||
Sbjct 8884 TTTACAAAGATCTGCAT 8868
Score = 114 bits (126), Expect = 1e-20
Identities = 160/219 (73%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 126901 CAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATC 126960
|| ||||||||||| ||||| ||||| || |||||||| || | ||||| |||
Sbjct 9308 CAGCACCAAATGTAGTGTAGATTCTTTCTGGATATTGTAGTCTGAAAGAGTGCGGCCATC 9249
Query 126961 GTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 127020
|| || ||||| ||||| | ||||||| |||||| || || || ||||| ||||| |
Sbjct 9248 CTCAAGTTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGTGGGATGCCTTCCTTAT- 9190
Query 127021 CGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCG-TACTCTCGACTTCGACGGTCACC 127078
| ||| ||| ||| || | | || | ||||| | | || || || || | || |
Sbjct 9189 CTTGAATTTTTGCTTTTACATTCTCAATAGTGTCAGATGCT-TCAACCTCTAATGTTATG 9131
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117
||||| || || |||||||||||||||||||||||| ||
Sbjct 9130 GTTTTCCCTGTAAGAGTTTTTACAAAAATCTGCATGCCT 9092
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | | || ||||| ||| | ||||| || || ||||| |||||||| |
Sbjct 9778 CCACCACGCAGCCTCAGCACCAGATGCAAAGTAGATTCCTTCTGAATGTTGTAATCCGAC 9719
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || || || || ||||| |||| | |||||||| || |||||
Sbjct 9718 AGGGTTCGTCCATCTTCCAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCTGGAGGA 9659
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||| ||||||||| ||| || ||| | | ||| | ||||| | | || ||
Sbjct 9658 ATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTTTCAATAGTGTCTGAAGCTTCTACC 9599
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || ||||| || || || || ||||||||||||||
Sbjct 9598 TCCAGGGTAATTGTCTTGCCAGTAAGGGTCTTCACAAAAATCTGCAT 9552
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| | || | || |||||||| | ||||| || ||||| || ||||||||
Sbjct 10463 TCCACCTCTTAGCCTCAGAACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAATCTGA 10404
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| || | ||| || | ||||||||| || |||| | |||||| ||||| |||||
Sbjct 10403 TAAGGTCCTTCCATCTTCCAACTGTTTTCCTGCAAAGATGAGTCGCTGTTGATCTGGAGG 10344
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTT-GAGTTGTTCGACGGTGTCCGTACTCTCGA 127064
||||| |||||||| ||| || ||||| || | || | |||||| | | || |
Sbjct 10343 AATGCCTTCCTTGTCTTGGATCTT-TGCTTTGACATTCTCAATGGTGTCAGAAGCTTCCA 10285
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| || | || | || ||||| || ||||| || ||||||||||||||
Sbjct 10284 CCTCCAGAGTAATTGTCTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 10236
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|| || || || | |||||||| ||| | || || || || |||||||||||||| |
Sbjct 8866 CCTCCTCGCAACCTCAACACCAGATGGAGAGTCGATTCCTTCTGAATATTGTAATCAGAC 8807
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| || ||||| | || | || ||||| || || ||
Sbjct 8806 AGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATGAGACGTTGCTGGTCTGGTGGA 8747
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || || |||||| ||| || ||| | | ||| | ||||| | | || |||
Sbjct 8746 ATTCCTTCTTTGTCCTGGATCTTTGCCTTCACATTTTCAATTGTGTCTGAAGCTTCCACT 8687
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || ||||| || || || |||||||||||||||||
Sbjct 8686 TCCAGTGTGATGGTCTTGCCTGTGAGGGTCTTTACAAAAATCTGCAT 8640
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || || | | ||||| ||| | || |||||||| ||||||||||| ||
Sbjct 10006 CCACCTCGCAACCTTAGCACCAGATGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAT 9947
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || ||||| || ||||| |||| | || ||||| || |||||
Sbjct 9946 AGGGTCCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCTGGAGGA 9887
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || || || ||| ||| ||| || | | ||||| |||||| | | || |||
Sbjct 9886 ATACCTTCTTTATCCTGGATCTTCGCTTTCACATTTTCGATGGTGTCTGAAGCTTCCACT 9827
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | ||||| || || || || || ||||| ||||||||
Sbjct 9826 TCCAGGGTAATGGTTTTTCCAGTAAGTGTCTTCACAAAGATCTGCAT 9780
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| | || || | ||||||||| | || || ||||| |||||||| || ||
Sbjct 11375 TCCACCTCTCAAACGTAGCACCAAATGAAGAGTGGATTCTTTCTGAATATTATAGTCCGA 11316
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| || || ||| || | |||||| || || |||| | |||||| ||||| || ||
Sbjct 11315 AAGTGTACGTCCATCTTCCAACTGTTTGCCTGCAAAGATGAGTCGCTGTTGATCTGGGGG 11256
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||| ||||| || ||||||| ||| | | || | ||||| | | || ||
Sbjct 11255 AATGCCTTCCTTATCTTGGATTTTCGCCTTCACATTCTCAATTGTGTCGGAAGCTTCCAC 11196
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| | || | || || ||||| ||||| || |||||||||||||||
Sbjct 11195 CTCCAGAGTAATGGTCTTCCCGGTAAGAGTCTTCACAAAAATCTGCATG 11147
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | | || ||||| ||| | || || || || ||||| |||||||| |
Sbjct 10918 CCACCACGCAGCCTCAGCACCAGATGCAAAGTGGATTCCTTCTGAATGTTGTAATCTGAC 10859
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || ||||| || |||||| |||| | || ||||| || || ||
Sbjct 10858 AGGGTTCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGA 10799
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || || ||||| || || ||| | | || | |||||| | | ||| |||
Sbjct 10798 ATACCTTCTTTGTCTTGTATCTTTGCCTTCACATTCTCAATGGTGTCTGAAGCCTCCACT 10739
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || ||||| || || || || ||||||||||||||
Sbjct 10738 TCCAATGTAATTGTCTTGCCTGTAAGTGTCTTCACAAAAATCTGCAT 10692
>seq302910
Length=12142
Score = 105 bits (116), Expect = 6e-18
Identities = 140/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 126924 CTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGA 126983
||||||| || |||||||| | || | ||| || || ||||| ||||| |||
Sbjct 11150 CTTTTTGTATGTTGTAATCTGAGAGAGTTCTTCCATCCTCAAGTTGTTTACCAGCAAAGA 11209
Query 126984 TCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG-AGTTGT 127042
| |||||||| ||||| || ||||| || || ||||| ||| ||| ||||| | | |
Sbjct 11210 TTAATCGCTGTTGATCTGGCGGTATTCCTTCTTTGTCT-TGAATTTTTGCTTTTACATTT 11268
Query 127043 TCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 127102
|| | ||||| | ||| ||||| | || | ||||| || |||||||||||||||
Sbjct 11269 TCAATTGTGTCTGATGGCTCAACTTCCAATGTTATTGTTTTCCCTGTCAGAGTTTTTACA 11328
Query 127103 AAAATCTGCATG 127114
||||||||||||
Sbjct 11329 AAAATCTGCATG 11340
Score = 86.0 bits (94), Expect = 6e-12
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 126924 CTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGA 126983
||||||| ||||||||||| | || ||| ||| ||||| ||||| || ||| |||
Sbjct 4320 CTTTTTGGATATTGTAATCTGAGAGGGTACGACCATCTTCTAGTTGTTTCCCTGCGAAGA 4379
Query 126984 TCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTT 127043
| | | ||| ||||| || || || || || || ||| |||||| ||| | | ||
Sbjct 4380 TGAGCCTCTGTTGATCAGGTGGGATCCCTTCTTTATCCTGGATTTTTGCCTTAACATTTT 4439
Query 127044 CGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 127103
| | ||| || | || ||||| | || | ||||| || || |||||||| ||||
Sbjct 4440 CTATGGTATCTGATGGTTCCACTTCCAGAGTTATTGTTTTACCAGTGAGAGTTTTCACAA 4499
Query 127104 AAATCTGCAT 127113
|||| |||||
Sbjct 4500 AAATTTGCAT 4509
>seq1341392
Length=603
Score = 98.7 bits (108), Expect = 9e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| |||||||||||||| || || ||||| ||| || ||||| ||||||
Sbjct 249 GTGGACTCCTTTTGAATATTGTAGTCAGACAATGTGCGGCCATCTTCCAGCTGCTTTCCA 190
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035
|| |||||| | ||| || || || || || || ||||| ||| ||| | | || ||
Sbjct 189 GCAAAGATCAGCCTCTGTTGGTCTGGTGGAATACCTTCCTTATCC-TGAATCTTGGCTTT 131
Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
|| | ||| | |||||| | ||| ||||| | ||| | || ||||| ||||| ||
Sbjct 130 GACATTTTCAATGGTGTCTGATGCCTCTACTTCAAGGGTGATTGTCTTGCCAGTCAGGGT 71
Query 127096 TTTTACAAAAATCTGCAT 127113
|| || || ||||||||
Sbjct 70 CTTCACGAAGATCTGCAT 53
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 467194442950080
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